Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1748 ATGAACAACAGTCTGGCATTTCTTGCAAGAACTGTTGCAACAAAATTTTGTAGCCCATCGCCATTGCGAATCTATTGTTCAACCTCCTCAGCGTCTTCTCCTCCTTCCAGCAATAAACTCTTTGTCGGAGGTTTCTCTCATTATTCATTTCTCTGTATCTTGTCTTGTTATGAATATGATGAGCTCTTAGCCGTGGATGAGAAGTCCCTCAAAGATGCTTTCTCTTCATTTGGTGAAGTCACTGAAGAGAGGATAGCTTATGATAAAGACAGTGGTCGGTCTAGAGGGTTTGGATTTGTCATATTTTCGGATGAAGATAATGCCAAAACTGCAAAAGACGCCATGGATAGCAAGGCACTTTTAGGAAGACCGTTGAGAATAAATTTTGCTCTTGAGAAGGTCCGTGGAGGGCCTGTTGTAGTTCCTCGGATCTCAGATATTAGACACACAAATAGGCGCAGGACTTGA 468 0.4231 MNNSLAFLARTVATKFCSPSPLRIYCSTSSASSPPSSNKLFVGGFSHYSFLCILSCYEYDELLAVDEKSLKDAFSSFGEVTEERIAYDKDSGRSRGFGFVIFSDEDNAKTAKDAMDSKALLGRPLRINFALEKVRGGPVVVPRISDIRHTNRRRT 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1748 155 SUPERFAMILY RNA-binding domain, RBD 31 138 IPR035979 GO:0003676
Lele01g1748 155 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 27 133 - -
Lele01g1748 155 Gene3D - 26 154 IPR012677 -
Lele01g1748 155 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 65 126 IPR000504 GO:0003723
Lele01g1748 155 SMART rrm1_1 39 128 IPR000504 GO:0003723
Lele01g1748 155 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 132 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1748 Lele-ChrLele01 14365848 14369828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1748 67 133 C2H2 Transcription Factor Family AT2G19380 38.806 5.63e-09 52.0