Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1736 ATGCAATGGACTCCTTCCACCGTTCGTCATGAATTTCCATTCTTGAGAGATTTCTCTGATGGTTGTATTATTTCAAATAATAATGAACTTTTGGAGGTTTCTCAAGAAAATACAGATTTACAAGCCCAGGATGGACCGGAATCTTTCAAAAATTCTACAAATGACAACGAATTGGAGAACTCTGTATCAGAAGATTATATTGATGATTATATCGTGGATCCTCACGAAGGTCAAGAATATTATGATGCTCATAAGGATGGGTTGACTAGTAAACCCATATCACAAGATATCAAAGTGGGATCTGAATCAGTTCAAAATTCTACAAATGACAGCGAAATGGATACTTTTCAATCAGAAGATTATATAAATATTGACGGTTATATTGTGGATGCTCATAAGTTATTTCAACAAATTTTTTTCAAGAACATAAAGATTGTTTCGCCCAGGCAGAAGACATCAAGCATCATACACTCCAACTGCAAGAAGACCCAATGTCAAAAGCTTTATTGTGAATGTTTTGCTGCTGGAGAATTATGTGGTCAGAATTCCAATTGCCAAGACTGTTATAATAGATGGAAGCATGAAAACAGAATTATTTTGGAGAGACAGAACACCATTTCATGTCACAATCCATTGGGACTTGTAAGTTCTTTGGCCAACCGCTTAAAGACAGAATAA 678 0.354 MQWTPSTVRHEFPFLRDFSDGCIISNNNELLEVSQENTDLQAQDGPESFKNSTNDNELENSVSEDYIDDYIVDPHEGQEYYDAHKDGLTSKPISQDIKVGSESVQNSTNDSEMDTFQSEDYINIDGYIVDAHKLFQQIFFKNIKIVSPRQKTSSIIHSNCKKTQCQKLYCECFAAGELCGQNSNCQDCYNRWKHENRIILERQNTISCHNPLGLVSSLANRLKTE 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1736 225 SMART CXC_2 153 194 IPR033467 -
Lele01g1736 225 PANTHER TESMIN/TSO1-RELATED 93 206 IPR028307 -
Lele01g1736 225 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 159 191 IPR005172 -
Lele01g1736 225 ProSiteProfiles CRC domain profile. 154 225 IPR005172 -
Lele01g1736 225 MobiDBLite consensus disorder prediction 37 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1736 Lele-ChrLele01 14114330 14116726 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1736 136 220 CPP Transcription Factor Family AT3G04850 32.941 4.92e-13 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lele01g1736 TCR 3.6e-10 No_clan