Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1728 ATGGAACCCAGATATGGATTTCTTGCTTTCTTCTTCATCTTCTTTTTCGCTTCAGTTTTTCCCAGTGCAGAGTCCAGTTGCAGCAAGGGTTGTGATTTAGCTCTAGGTTCTTACTACGTTTGGCCAGGTTCCAATCTCTCATTCATCACGCAACAAGTGCGATCCCAGATTCTGACAGACGAAAACGTCATCGTCAGCTACAACAAAGGCCAAACAATCAGCAGAGACTATGTCGAATCCACTACAAGAATCAACATCCCATTCCCATGTGATTGTCTTGAAGGTGGAATTCTGGGTCATTTGTTTCAGTACGAGGTTAACCAAGGGGATACGTACAAGACAATTGCTGAGACTTACTATTCCAATTTGACCACTGTTGAGTCGTTGAGGAATTTAAATGGCGACACCATACCTCAAAGTGGAACGCTTAATGTTGCTGTTAATTGTTCTTGTGGTAACAGCGAAGTATCAAAACTATATGGATTGTTCATCACATGGCCACTTAGGCCTGAGGATACTTTGGAATCAATTGCCAGTAAGGAGAAACTTGACGCAGGGTTGCTGCAGAGGTTATATGGTAACTTCTATGCTTTTCAACGTCACAGTGGCATTAAACACAGATGCCACTACTTTCAGGTTGCAGATTTTGGATTAACTAAACTGACTGAAGTGGGAAACTCATCACTTCCCACTGGTCATCTTGTGGGAACATTTGGATATATGCCACCAGAGGCTCGATATGCCCAGTATGGTGATGTCTCTCCTAAAGTAGATGTCTACGCTTTTGGAGTTGTTCTTTTTGAACTTATTTCAGCCACGGAAGCAATTGTCAAGACAACTCCATCCGATGCCGACTCAAAGGGCCTTTTTCATGGAGTTCTTAATCAGCCTGATCCTTTGGAAGATCTTTGCAAATTGGTCGACCCAAGGCTGGGGGATGACTACCCTACTGACTCAGTTTTGAAAATGGCTCAACTAGCAAAAGCATGCACACAAGAGAATCCCCAACTGCGTCCAACTATGAGATCTATTGTAGTTGCTCTCATGACACTTTATTCTTGCACTGCTGATGATTGGGATGTTGCTGCCTTCTACAATAATCCTAATCTCATGGATCTTATGTCTGGAAGATAG 1134 0.4295 MEPRYGFLAFFFIFFFASVFPSAESSCSKGCDLALGSYYVWPGSNLSFITQQVRSQILTDENVIVSYNKGQTISRDYVESTTRINIPFPCDCLEGGILGHLFQYEVNQGDTYKTIAETYYSNLTTVESLRNLNGDTIPQSGTLNVAVNCSCGNSEVSKLYGLFITWPLRPEDTLESIASKEKLDAGLLQRLYGNFYAFQRHSGIKHRCHYFQVADFGLTKLTEVGNSSLPTGHLVGTFGYMPPEARYAQYGDVSPKVDVYAFGVVLFELISATEAIVKTTPSDADSKGLFHGVLNQPDPLEDLCKLVDPRLGDDYPTDSVLKMAQLAKACTQENPQLRPTMRSIVVALMTLYSCTADDWDVAAFYNNPNLMDLMSGR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1728 377 CDD LysM 104 138 IPR018392 -
Lele01g1728 377 Pfam LysM domain 104 143 IPR018392 -
Lele01g1728 377 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 212 362 IPR044812 GO:0019199|GO:0045087
Lele01g1728 377 Gene3D Transferase(Phosphotransferase) domain 1 201 363 - -
Lele01g1728 377 ProSiteProfiles Protein kinase domain profile. 5 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1728 377 SMART serkin_6 109 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1728 377 Pfam Protein kinase domain 211 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1728 377 SUPERFAMILY Protein kinase-like (PK-like) 211 345 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1728 Lele-ChrLele01 13838561 13845806 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1728 212 377 Receptor kinase-like Gene Family AT3G21630 60.355 1.65e-52 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele01g1728 Pkinase 6.6e-12 CL0016