LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele01g1710	ATGGAGCCCAGATATGGATTTCTTGCTTTCTTCTTCATCTTCTTTTTCGCTTCAGTTTTTCCCAGCGCAGAGTCCAGTTGCAGCAAGGGTTGTGATTTAGCTCTAGGTTCTTACTACGTTTGGCCGGGTTCCAATCTCTCATTCATCACGCAACAAGTGCGATCCCAGATTCTGACAGACGAAAACGTCATCGTCAGCTACAACAAAGGCCAAACAATCAGCAGAGATTATGTCCAATCCACTACAAGAATCAATATCCCATTCCCATGTGATTGTCTTGAAGGTGGAATTCTGGGTCATTTGTTTCGGTACGAGATTAACCAAGGGGATACCTACGAGACAATTGCTGAGACTTACTATGCCAATTTGACCACTGTTGAGTCGTTGAGGAATTTGAATGGCGACACAATACCTCAAAGTGGAACACTTAATGTTGCTGTTAATTGTTCTTGTGGTAACAGCAAAGTATCAAAGCTCTATGGATTGTTTATCACATGGCCACTCAGGCCTGAGGATACTTTGGAATCAATTGCCAGTAATGAGAAACTTGACGCCGGGTTGCTGCAGAGGTATAATCCGGGTGTGAATTTCAGCCAAGGGAGTGGATTGGTTTATATACCAGGCAAAGGTCTGTCTGGTGGGGTTATTGCTGGAATATCTATTGGAGTAGTAGCTGGACTTCTGCTGCTGGCGGTTTCTATATATTTTGGATATTTCCGAAAGAAGATAGATGAAAGGAAATCACTCTCTCAAGATTTCCAGGAGTTCTCTGTTCAGGAAGAGAAGGATGAAGCCTCTGCTAATGTTGAATCTGAAACTTCAGGATATGGTGGTCCTACTGGCATCACAGTGGACAAATCAGTGGAGTTCTCATATGAAGAACTAGCTGCTGCCACAAATAACTTCAGTATGGCTAACAAAATTGGTCAAGGAGGCTTTGGTGCTGTCTATTATGCAGAGCTGAGAGGCGAGAAAGCCGCAATCAAGAAGATGGATATGCAAGCAACAAGAGAATTTCTAGCTGAATTAAAAGTCCTAACAAATGTTCATCACCTTAACCTGGTGCGCTTAATTGGATATTGCACTGAGAACTCTCTTTTCCTGGTTTATGAATACATTGATAATGGAAACTTAAGTCAACATCTGCGTGGCACAGGAAGAGATCCACTGACATGGTCTACTCGAGTTCAAATTGCTCTGGATTCTGCCAGAGGTCTTGAATATATTCATGAGCATACAGTTCCTGTGTATATCCACCGTGACATAAAGTCGGCAAATATATTGATAGATGAGAGCTTCCATGGGAAGGTTGCAGATTTTGGATTAACTAAACTGACTGAAGTGGGAAACTCATCACTTCCCACTGGTCATCTTGTGGGAACATTTGGATATATGCCGCCAGAATATGCCCAATACGGTGATGTCTCTCCTAAAGTAGATGTCTACGCTTTTGGAGTTGTTCTTTTTGAACTTATTTCAGCCAAGGAAGCAATTGTCAAGACAACTCAATCGGATGCCGACTCAAAGGGGCTTTTTCATGGAGTTCTTAATCAGCCTGATCCTTCGGAAGATCTTCGCAAATTGGTCGACCCAAGGCTGGGGGATGACTACCCAACTGACTCAGTTTTGAAAATGTCACAACTTGCAAAAGCATGCACACAAGAGAATCCCCAACTGCGTCCAACTATGAGATCTATTGTAGTTGCTCTCATGACACTTTATTCTTCCACTGCTGATGATTGGGATGTTGCTGCCTTCTACAATAATCCTAATCTCATGGATCTTATGTCTGGAAGATAG	1800	0.4267	MEPRYGFLAFFFIFFFASVFPSAESSCSKGCDLALGSYYVWPGSNLSFITQQVRSQILTDENVIVSYNKGQTISRDYVQSTTRINIPFPCDCLEGGILGHLFRYEINQGDTYETIAETYYANLTTVESLRNLNGDTIPQSGTLNVAVNCSCGNSKVSKLYGLFITWPLRPEDTLESIASNEKLDAGLLQRYNPGVNFSQGSGLVYIPGKGLSGGVIAGISIGVVAGLLLLAVSIYFGYFRKKIDERKSLSQDFQEFSVQEEKDEASANVESETSGYGGPTGITVDKSVEFSYEELAAATNNFSMANKIGQGGFGAVYYAELRGEKAAIKKMDMQATREFLAELKVLTNVHHLNLVRLIGYCTENSLFLVYEYIDNGNLSQHLRGTGRDPLTWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDESFHGKVADFGLTKLTEVGNSSLPTGHLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLFELISAKEAIVKTTQSDADSKGLFHGVLNQPDPSEDLRKLVDPRLGDDYPTDSVLKMSQLAKACTQENPQLRPTMRSIVVALMTLYSSTADDWDVAAFYNNPNLMDLMSGR	599

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele01g1710	599	Pfam	LysM domain	104	143	IPR018392	-
	Lele01g1710	599	SUPERFAMILY	Protein kinase-like (PK-like)	284	570	IPR011009	-
	Lele01g1710	599	FunFam	PTI1-like tyrosine-protein kinase 3	373	584	-	-
	Lele01g1710	599	SMART	serkin_6	302	574	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele01g1710	599	ProSitePatterns	Protein kinases ATP-binding region signature.	308	330	IPR017441	GO:0005524
	Lele01g1710	599	Pfam	Protein tyrosine and serine/threonine kinase	304	569	IPR001245	GO:0004672\|GO:0006468
	Lele01g1710	599	Gene3D	Phosphorylase Kinase; domain 1	279	372	-	-
	Lele01g1710	599	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	417	429	IPR008271	GO:0004672\|GO:0006468
	Lele01g1710	599	PANTHER	CHITIN ELICITOR RECEPTOR KINASE 1-RELATED	11	584	IPR044812	GO:0019199\|GO:0045087
	Lele01g1710	599	FunFam	LysM receptor kinase 2	281	372	-	-
	Lele01g1710	599	Gene3D	Transferase(Phosphotransferase) domain 1	373	588	-	-
	Lele01g1710	599	ProSiteProfiles	Protein kinase domain profile.	302	574	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele01g1710	Lele-ChrLele01	13211600	13232418	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele01g1710	8	599	Receptor kinase-like Gene Family	AT3G21630	57.143	0.0	669

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LysM	Lele01g1710		PK_Tyr_Ser-Thr	3.4e-47	CL0016