Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1687 ATGAGAAATGGGTCGAGCGGGTGTGTGAGGAAGAAGAATGTGTCGACGTGTCAAAGTGGGGAGGGGTTTGTGAAAGTGGCTCGTGTGAAGGTGCCAGATACATCAAAGGCACGTGTGGACAAGAGGGAGAGTATCAGCTTGAAAGGATGTAAGGAGAAGTGCTTGAGGGATTGTTCGTGTGTAGCGCATACAAATGTTGATGAGGTCAAACAAAGTGGGTGCTTGACGTGGCATGCAGATATGGAAGACATCAGAACATTCAACAATCTGGGCCAAGATTTGTACGTGCGTGTGGATGCACATGAATTGGTCCGCTTTGGTGTATTCTTGTCTGCAGCTAAATATGAAAAGAAGCATTATGGTTCCCTTGGCAAGAAGGGGATGATGACACTCGTAACCATTTCTGTTTGCCTCATAACATTCCTGGTGATCTCTTTTATGTATTGGTTTGTAAAGAACAAGAATCAAGCAAAAAGAATGCAGAAACGAAATTTGTTTGATGGAGAAAACGATTCCGATTTAACTCTCTATGATCTAAAGGAGATTATTGAGGCAACAAACAATTTCTCAGATGCTAATATGCTCGGACGAGGGGGTTTTGGTTATTTTGGTATGGCAAGAATATTTAGTGGAGACGAGACCGAAGCAAACACAAATCGTGTTGTTGGAACCTATGGTTATATGTCACCTGAATATGCAATGGAAGGGATTTTCTCAATAAAATCAGATGCATATAGCTTTGGAATTTTACTTTTGGAGATTGTTACTAGCAGAAAGAATAGTGGTCATTATGATGACAATACTTCTACTTTGGTTGGACATATTTGGAACCTTTGGAGAGAAAGTAGAGCTATGGAGATTGTTGATCCATCATTAATTGGTGAAAATTGCCCTGAACATGAAGTACTGAAATGCATCCAGATTGGGCTTTTATGGGTGCAAGAATATGCAACAGATAGGCCGACTATGTTAGAAGTTGTTTCCATGTTGGATAATGACTCCACTCTTGCTCCTCCAAAGCAACCAGCATTTCTTTTCAAGAAAACTAATAATGGTAATGATTCAAATCCGTCAAACAGTGAAGGGCTTAATTCAATAAACGAGATGAGTACTACTGTGGTTGAAGCTCGTTGA 1134 0.4048 MRNGSSGCVRKKNVSTCQSGEGFVKVARVKVPDTSKARVDKRESISLKGCKEKCLRDCSCVAHTNVDEVKQSGCLTWHADMEDIRTFNNLGQDLYVRVDAHELVRFGVFLSAAKYEKKHYGSLGKKGMMTLVTISVCLITFLVISFMYWFVKNKNQAKRMQKRNLFDGENDSDLTLYDLKEIIEATNNFSDANMLGRGGFGYFGMARIFSGDETEANTNRVVGTYGYMSPEYAMEGIFSIKSDAYSFGILLLEIVTSRKNSGHYDDNTSTLVGHIWNLWRESRAMEIVDPSLIGENCPEHEVLKCIQIGLLWVQEYATDRPTMLEVVSMLDNDSTLAPPKQPAFLFKKTNNGNDSNPSNSEGLNSINEMSTTVVEAR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1687 377 CDD PAN_AP_plant 15 98 - -
Lele01g1687 377 Pfam PAN-like domain 17 84 IPR003609 -
Lele01g1687 377 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 209 335 - -
Lele01g1687 377 SUPERFAMILY Protein kinase-like (PK-like) 203 330 IPR011009 -
Lele01g1687 377 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 201 - -
Lele01g1687 377 Gene3D Transferase(Phosphotransferase) domain 1 183 340 - -
Lele01g1687 377 ProSiteProfiles PAN/Apple domain profile. 17 99 IPR003609 -
Lele01g1687 377 SMART ntp_6 18 98 IPR003609 -
Lele01g1687 377 MobiDBLite consensus disorder prediction 347 377 - -
Lele01g1687 377 ProSiteProfiles Protein kinase domain profile. 1 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1687 377 Pfam Protein tyrosine and serine/threonine kinase 203 268 IPR001245 GO:0004672|GO:0006468
Lele01g1687 377 Pfam Domain of unknown function (DUF3403) 333 377 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1687 Lele-ChrLele01 12179018 12184260 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1687 80 377 Receptor kinase-like Gene Family AT4G23280 38.994 1.35e-49 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele01g1687 PK_Tyr_Ser-Thr 5.1e-09 CL0016