Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1680 ATGCGCTTGCTGGCTCACAATGGCCTCTTCTCTATCATCAAATGCAACACCAATGAAGAAGAAACTGAAGAAGAAGTAGCATATGATCTCACTTCTGCATCAAAACTTCTTGTGAGTGGCACAGACGGTTGTTTATCTCCAATGGTTCAATTGACAATAAACCCTACTATGATTAATTTGTATCATCACTTGGGGAAATGGGTTCAGCGGAAGGAAAATACACTGAGAGAGACAATATTTGGTGCAAATCCTTATGACATGCTTAAGCAAAATCCAGCAGATATGGCGTTTATGCAAGAAGCAATGGCTAGTGACTCAAGATTCTTGAAAATGGCACTGATCAAAAACTTGGATTCTGCTTTGGATGGATTGGGTTCTATCGTTGATGTTGGTGGTGGAAATGGGACCACTGCAAAGATAATCTGTGAAGCATTCCCAAATGGGGACATGTTCAAATCCATCCCTCAAGCAGATGCAGTTCTGATTAAGTGGGTCTTACTTCACTGGGGTGACGATGACTGCATAAAGATACTTAAAAATGCCAAGGAAGCTATATCAAGCAAAGGAAATGAAGCAAAAGTGATCATCATAGATATGGTGTTGAATGAGAAGCAAGACCAGAATGAAATGCTTGAAACAAAGCTCTTAATCAACATAATTTTGGCAGCTGAGCTTAATTCAAAAGCAAGATCTATGGAAGAATGGAAGCAACTGTTCCTGAAGGCAGACTTCAAGGATTACAAGATATTTCCTATATTTGGCTTTAGGTCTCTCATTGTGCTTCACCCTTAA 792 0.3965 MRLLAHNGLFSIIKCNTNEEETEEEVAYDLTSASKLLVSGTDGCLSPMVQLTINPTMINLYHHLGKWVQRKENTLRETIFGANPYDMLKQNPADMAFMQEAMASDSRFLKMALIKNLDSALDGLGSIVDVGGGNGTTAKIICEAFPNGDMFKSIPQADAVLIKWVLLHWGDDDCIKILKNAKEAISSKGNEAKVIIIDMVLNEKQDQNEMLETKLLINIILAAELNSKARSMEEWKQLFLKADFKDYKIFPIFGFRSLIVLHP 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1680 263 Gene3D Vaccinia Virus protein VP39 148 263 IPR029063 -
Lele01g1680 263 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 44 260 IPR029063 -
Lele01g1680 263 Gene3D - 76 102 - -
Lele01g1680 263 Gene3D Vaccinia Virus protein VP39 103 147 IPR029063 -
Lele01g1680 263 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 263 IPR016461 GO:0008168
Lele01g1680 263 PANTHER O-METHYLTRANSFERASE 1 248 IPR016461 GO:0008168
Lele01g1680 263 Pfam O-methyltransferase domain 145 244 IPR001077 GO:0008171
Lele01g1680 263 Gene3D - 1 68 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1680 Lele-ChrLele01 12114630 12116192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1680 2 263 Monolignol Biosynthesis Gene Families AT1G51990 26.510 3.72e-22 92.4