Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1678 ATGGATGGAATTGGAGGCAAAACCAGAGAGCTGTTTCATGGCCAATCTCAGCTGTTGAAATACATGTACCTTTGGATGTCTTCTGTATGTCTCAAGTGTGTCATTGAGCTAGAAATACCAGACATAATCCACAAGCATGGAAAATCCATCCCTTTTTCACAGTTGGTGTCAGCTCTCAAAGTTCCACCCTCTAAAGCTACCTTTGTGAAAGGGCTCATGCGCTTGCTGGCTCACAATGGCCTCTTCTCTATAATCAGAAGCAACAACAATGAAGAAGAAAGTGAAGAAGTAGCATATGATCTCACTTCTGCGTCACAGCTTCTTGTGAGTGGAACAAACCATTGCTTAACTTCAATGGTTCAGTGGGCACTTAGGTCTGCTAGGTTTGAGATGTATCAACACTTGGGAAAATGGGTTCGTGGGAAGGAGAATACACTGAGAGAAACAGCATTTGGGGTAGGTTTTTATGACTTCCTTAATCAAAATCCTGCAGATTTGGCAGCCTTCCAGGAAGCAATGGCTAGTGATTCTGAATTCATGAAAGTGGCACTGCCTGACTTAGAACCTATTTTTGAGGGCTTGAGTTCCATCGTAGATGTCGGTGGTGGAACTGGGACAACTGCCAAGATTATCTGTGAAGCATTTCCCAAGTTGAAATGCACGGTGCTTGATCTTCCTGATATTGTTGCAGGTTTATCTGGAGTCACCAATTTGAGTTTTGTTAGTGGGGACATGCTCAAATCCATCCCTCATGCTGACGTAGTTCTGTGGGAATATCCTAATATCTAG 789 0.4335 MDGIGGKTRELFHGQSQLLKYMYLWMSSVCLKCVIELEIPDIIHKHGKSIPFSQLVSALKVPPSKATFVKGLMRLLAHNGLFSIIRSNNNEEESEEVAYDLTSASQLLVSGTNHCLTSMVQWALRSARFEMYQHLGKWVRGKENTLRETAFGVGFYDFLNQNPADLAAFQEAMASDSEFMKVALPDLEPIFEGLSSIVDVGGGTGTTAKIICEAFPKLKCTVLDLPDIVAGLSGVTNLSFVSGDMLKSIPHADVVLWEYPNI 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1678 262 Gene3D - 5 108 IPR036388 -
Lele01g1678 262 SUPERFAMILY "Winged helix" DNA-binding domain 9 111 IPR036390 -
Lele01g1678 262 PANTHER O-METHYLTRANSFERASE 18 256 IPR016461 GO:0008168
Lele01g1678 262 FunFam Coniferyl alcohol 9-O-methyltransferase 4 108 - -
Lele01g1678 262 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 262 IPR016461 GO:0008168
Lele01g1678 262 Pfam O-methyltransferase domain 132 256 IPR001077 GO:0008171
Lele01g1678 262 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Lele01g1678 262 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 257 IPR029063 -
Lele01g1678 262 Gene3D Vaccinia Virus protein VP39 110 259 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1678 Lele-ChrLele01 12094857 12095645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1678 29 259 Monolignol Biosynthesis Gene Families AT5G54160 23.830 2.77e-16 75.9