Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1662 ATGGCGAAAGAAGGCGCTCTTCTCGTGAGTTCGAAAGCGGAGTTGAAACGGAAGGAGAAGCAACAGAAGAAGGCCAAGTCTGGCGGTTTTGAGTCCTTGGGTCTTAGCCCCAATGTATACAGAGGAATCAAGCGCAAAGGTTATAAGGTGCCCACTCCAATTCAGAGGAAGACGATGCCAATCATTCTTTCTGGCGCTGATGTTGTGGCCATGGCTCGTACTGGGTCTGGTAAAACCGCTGCGTTTCTCGTCCCCATGCTCGAGCGTTTGAATCAGCATCTTCCTCAGGGTGGTGTTAGAGCTCTCATTTTGTCCCCTACAAGAGACTTGGCGCTTCAGACTTTGAAGTTCACTAAAGAGCTTGGCCACTTCACTGATCTTCGTGTTAGTTTATTAGTTGGAGGTGATAGTATGGAAAGTCAGTTTGAGGAGTTAGCTCAAAATCCTGACATTATAATTGCGACGCCTGGTAGGCTTATGCACCATTTGTCTGAAATTGATGACATGTCACTGCGCACTGTGGAATATGTTGTTTTTGATGAGGCAGATTGTTTATTTGGCATGGGTTTTGCCCAGCAATTGCATCAAATTCTTACACAGCTAGGTGAGAACCATCAAACCTTGCTTTTCAGTGCTACATTACCTAGTGCCCTTGCTGAATTTGCAAAGGCTGGCCTGCGTGACCCTCAGCTTGTTCGTCTGGATTTGGAAACTAAAATCAGCCCTGACCTGAAGGTTGCCTTTTTCACCTTGAGGCAGGAAGAAAAATATGCAGCATTATTGTATTTGATTAGGGAGCAAATTAGTTCTGATCAGCAGACACTAATATTTGTATCCACAAAACATCACGTGGAATTTCTGAACACATTGTTTAGGGAAGATGGTATTGAGCCATCTGTATGTTATGGTGACATGGATCAAGATGCTCGCAAAATTCATATAGCAAGGTTCAGGTCAAGAAAGACAATGTTGTTGATTGTGACAGATGTTGCTGCTCGGGGCATAGATATTCCATTACTTGATAATGTTATCAATTGGGACTTTCCCCCCAAGCCTAAAATATTTGTTCATCGGGTTGGAAGGGCAGCAAGAGCAGGTCGCACTGGTGCTGCCTTTTCTTTTGTGACTTCGGAGGATATGCCATACCTTTTGGATCTTCATTTGTTTCTCTCAAGACCAATCAGAGCTGCTCCAACTGAAGAAGAAGTTCTGCAGGATATGAATGGAACATTTTCCAAAATTGAACAGGCAATAGCAAAGGGAGAAACTGTTTATGGCCGTTTCCCTCAAAATGTCTTAGACCTTGTTTCAGACAGAATTCAGGAAACCATTGACGCTTCTGCTGAACTACAGTCATTGCAGAAGACCTGTCAAAATGCCTTTCGTTTATACTCGAAGACAAAACCCTTACCTTCAAAGGAGTCTATTAGAAGAGTAAAAGATTTACCACGCGAGGGGTTGCATCCAATTTTCAAGAATGTATTGGAAACAGGGGAATTAATGGCACTTGCTTTCTCGGAGCACCTAAAAAAGTTTAGGTCTAAGCAGACTGTTTTGGAGGCTGAAGGTGAAGCAGCTAAATCAAAGCATCTACAGGGACCTGCAGGTCAATGGGTTGATGTGATGAAGCAAAAAAGAGCCATTCATGAGAATATTATAAATTTAGTCCACAAGCAACGCTCTAAGAATAACACAAAAGAGGGGGAAATTGAATTGGATATCACTCCTTCTGTGGGGAAAGGCAAAAAAGCAGTGTCTGGTTCTAAGAGAAAGCCACAAAGTTTTAAGGATGAGGAATACTACATAAGTTCAATACCCCAAAATCATCATATGGAAGCAGGTCTTTCTGTCAGGGCTAAAGAAGACTTTTCTTCAAATAGATTGGAATCAGCTGTCCTCGATCTAGTTGCAGATGACAGTGCTGGCATTCAGAAACAAAAGTCAGTATATCATTGGGATAAGATAAAGACAGAGGGTGGGGCAAAAGTGAAGGCCACCAAGACTGGTATTTATAAGAAGTGGAAAGAACGCTCACACAATAAGATAGCTCTCAAGGGGATGGATAATGAAGGTGATTCTTATGGATCCACAAGTTCGGCAGGGCATTCTCGAGGCGGTCCCCGGAAATTTAAGGGCGGCAAGAACCAGCATTCAGTGCTAAATGCTCATGTGCGTTCAGAGATCAAAGATTTAGATCAAATTCGAAAGGAGAGGCAGCAGAAAGCAAACAGACTTTCATATCTGAAGAGCCAGTCTTATTTAGGAGCAGAGGAAGTGAGGATCAGAAGGAAAATCAGAAATGAATTGGAGAGATATGATCCTCAAGTGAATTCACATGTTTCAATTTGCCTTATTCTCCATTGCTTTTCTAATCTCAATCATGGTACTGCTCCAGTATATTAA 2403 0.4257 MAKEGALLVSSKAELKRKEKQQKKAKSGGFESLGLSPNVYRGIKRKGYKVPTPIQRKTMPIILSGADVVAMARTGSGKTAAFLVPMLERLNQHLPQGGVRALILSPTRDLALQTLKFTKELGHFTDLRVSLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEIDDMSLRTVEYVVFDEADCLFGMGFAQQLHQILTQLGENHQTLLFSATLPSALAEFAKAGLRDPQLVRLDLETKISPDLKVAFFTLRQEEKYAALLYLIREQISSDQQTLIFVSTKHHVEFLNTLFREDGIEPSVCYGDMDQDARKIHIARFRSRKTMLLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGAAFSFVTSEDMPYLLDLHLFLSRPIRAAPTEEEVLQDMNGTFSKIEQAIAKGETVYGRFPQNVLDLVSDRIQETIDASAELQSLQKTCQNAFRLYSKTKPLPSKESIRRVKDLPREGLHPIFKNVLETGELMALAFSEHLKKFRSKQTVLEAEGEAAKSKHLQGPAGQWVDVMKQKRAIHENIINLVHKQRSKNNTKEGEIELDITPSVGKGKKAVSGSKRKPQSFKDEEYYISSIPQNHHMEAGLSVRAKEDFSSNRLESAVLDLVADDSAGIQKQKSVYHWDKIKTEGGAKVKATKTGIYKKWKERSHNKIALKGMDNEGDSYGSTSSAGHSRGGPRKFKGGKNQHSVLNAHVRSEIKDLDQIRKERQQKANRLSYLKSQSYLGAEEVRIRRKIRNELERYDPQVNSHVSICLILHCFSNLNHGTAPVY 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1662 800 CDD SF2_C_DEAD 251 359 - -
Lele01g1662 800 MobiDBLite consensus disorder prediction 1 30 - -
Lele01g1662 800 Coils Coil 731 751 - -
Lele01g1662 800 SMART ultradead3 47 247 IPR014001 -
Lele01g1662 800 CDD DEADc_DDX54 28 233 - -
Lele01g1662 800 MobiDBLite consensus disorder prediction 686 715 - -
Lele01g1662 800 Gene3D - 246 480 IPR027417 -
Lele01g1662 800 SMART helicmild6 285 366 IPR001650 -
Lele01g1662 800 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 14 679 - -
Lele01g1662 800 Gene3D - 3 235 IPR027417 -
Lele01g1662 800 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 256 405 IPR001650 -
Lele01g1662 800 MobiDBLite consensus disorder prediction 10 26 - -
Lele01g1662 800 Pfam Helicase conserved C-terminal domain 255 366 IPR001650 -
Lele01g1662 800 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 384 IPR027417 -
Lele01g1662 800 Pfam DEAD/DEAH box helicase 52 219 IPR011545 GO:0003676|GO:0005524
Lele01g1662 800 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 59 232 IPR014001 -
Lele01g1662 800 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 28 56 IPR014014 GO:0003724
Lele01g1662 800 SMART DBP10CT_2 634 677 IPR012541 GO:0003723|GO:0003724|GO:0005524|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1662 Lele-ChrLele01 11830868 11836925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1662 30 399 Eukaryotic Initiation Factors Gene Family AT1G72730 33.065 1.61e-59 206