Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1646 ATGCTTGATGGGGAGGTACCAAGCAAAGGGGTCTTTGGCAATGCAAGTGCAATATCACTTGTGGGGAATAGCAAGCTTTGTGGAGGCATATCAAAGTTGGAGCTACCACCATGCCCTATCAAATCTATTGGACAAAGAAAACATCAAAACTTCAAGTTAATCATATCAATATGTTGTGTGATTGCTTTTCTTCTTCTAGCATCTGTTGTTGCCATTTATCATTGGAGGAAAAGAAGCCAGAAATCATCTTCAAGTTCACCAACAATTGAAATGATTTCCAAAGTATCGTATCAAAGTTTGTACAACGCTACAGATGGATTCTCTGTCAACAACTTGATAGGATCTGGGAGTTTTGGCTCTGTATATAAAGGAAGTACTGAGTCTAATGAAGTTGTTGCGATAAAGGTCATCAACCTTCACATGAGGGGAGCTAACAAGAGTTTCGTTGCCGAATATTACAAGGGCCATGAATTTAAGGCTCTAGTTTATGAGTATATGGTGAATGGAAACTTGGAAAATTGGTTGCATTCTAGAATAGAAAATCCAGATCCTCCAAGAATTTTGCTCCTTGATCAAGTAATAAATATTCTTACTGATATTGTGCATGCATTAATCTATCTTCACTATGAATATGGGCAACCTCTAGTTCATTGTGATCTGAAGCCAAGCAATGTCCTTCTTGATGATAACATGGTTGCTCATTTGAGTGATTTCGGATTGACAAGATTGCTCTCAACTGTTGAAGCCATCTCTAATGAACAAAGTAGTACAATTGGAATAAAGGGCACCATTGGCTATGTTCCTCCAGAATATGGAATGGGTTCAGAGGTATCAATACAAGGTGACATGTATAGCTTTGGCATTCTTGTCTTAGAGATGTTAACTAAAAGAAGACCCACCGAGAATATGTTTAATGATGGTCACAATCTTCAAACATGTGTGAAAATTGCTTTTCCAAACAAGCTTTTGGAAGTTGTGAGCCCAACTATTCTTCCACGAGAAACACAACATACAGTGGGAGCATCAAGTGGCTTCTCGGACAACATGATGCAAACCCATCCTAATGTTGAGAAATGCTTGCATTCTTTATTTAAGATCGGACTTGCCTGTTCAATGGAATCCCCCCATGAAAGAATGAGTGCAATTGATGTCATCAAGGAACTAAACTCTATCAAAAGTCTTTTTCCATTATGGTAA 1197 0.3826 MLDGEVPSKGVFGNASAISLVGNSKLCGGISKLELPPCPIKSIGQRKHQNFKLIISICCVIAFLLLASVVAIYHWRKRSQKSSSSSPTIEMISKVSYQSLYNATDGFSVNNLIGSGSFGSVYKGSTESNEVVAIKVINLHMRGANKSFVAEYYKGHEFKALVYEYMVNGNLENWLHSRIENPDPPRILLLDQVINILTDIVHALIYLHYEYGQPLVHCDLKPSNVLLDDNMVAHLSDFGLTRLLSTVEAISNEQSSTIGIKGTIGYVPPEYGMGSEVSIQGDMYSFGILVLEMLTKRRPTENMFNDGHNLQTCVKIAFPNKLLEVVSPTILPRETQHTVGASSGFSDNMMQTHPNVEKCLHSLFKIGLACSMESPHERMSAIDVIKELNSIKSLFPLW 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1646 398 PANTHER OS04G0122200 PROTEIN 2 392 - -
Lele01g1646 398 ProSiteProfiles Protein kinase domain profile. 107 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1646 398 ProSitePatterns Protein kinases ATP-binding region signature. 113 135 IPR017441 GO:0005524
Lele01g1646 398 Gene3D Transferase(Phosphotransferase) domain 1 166 394 - -
Lele01g1646 398 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 166 396 - -
Lele01g1646 398 Gene3D Phosphorylase Kinase; domain 1 67 154 - -
Lele01g1646 398 Pfam Protein kinase domain 151 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1646 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Lele01g1646 398 SUPERFAMILY Protein kinase-like (PK-like) 80 388 IPR011009 -
Lele01g1646 398 SMART serkin_6 107 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1646 Lele-ChrLele01 11631836 11633498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1646 2 395 Receptor kinase-like Gene Family AT3G47570 43.256 6.26e-98 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele01g1646 Pkinase 4.3e-25 CL0016