Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1621 ATGTTGATGATGCTTGGTGTAGGTGCTTCTTGGGAAGGCATGCAGGCAATCTGTTCGATATTGTTCTTGTATGGAGTGATTGTGTTAGGGAATTCGGATATTGATGCGCTACTTCAACTCAAGAAGAGCATTCGAAATGACCCTTCTGGACTAGTTAATTCTTGGGATTCCAGGTCTTTAGCTTCTGATGGATGTCCTCAGAATTGGTATGGAATATTTTGCACTGAAGGCAATGTTATATCAATAACTCTGGATAATGCTGGTTTGGTTGGAGAGTTCAATTTCCTTGCCATTAATGGCCTTAAAATGCTTCGGAACTTGTCACTTTCAAACAACCAGTTCACGGGAAGCGTCTCACATTTCGGTCCAATGGAATCACTAGAGTTTCTTGATCTTTCAGTCAACAAGTTTCATGGGTTGATACCCTCTGACTTGCTTGAACTGCATAACATAGTGTACTTAAATCTTTCATCAAACCAATTTGATGGTACAGTTCCTGTCGGCTTTGACAAACTCAAGCGGTTGAAGTACTTAGATTTGTGCTCTAATAACTTTTCTGGGGATATTATGCATATCTTTTCTCATATGGGTGGCGTGGTTCATGTTGACCTAAGCACCAACAGGTTTTCTGGTTCACTGGATTTGGGACTTGGAAACAGCTTGTTTCTCTCCTCAATTCAGTATTTAAATGTCAGCCACAATTCCTTGACTGGTGATCTGTTTGCTCATGATGGGATGCCATACCTTGACAGTTTAGAGGTCTTTGATGCTAGTAATAATCAATTAGTGGGTAATATTCCTTCCTTCACATTCGTGGTATCTCTGAGGATTCTTTGGCTCGGATGCAACCAGTTATCTGGTTCTCTTCCTGAAGGTCTATTGAAGGAGAGTTCAATGGTGCTGTCTGAACTGGATCTTAGTCAAAACAAGCTCAGAGGTCCTGTTGGAAGCATTACTTCTGTAACTCTGAAGAAGCTTAATTTATCTTCAAACAAACTGTCAGGACCCTTACCTTTCAAGTTGGGCCACTGTGCCATAATAGATTTAAGTAACAACATGCTATCGGGTAACTTGTCGAGAATTCAGTATTGGGGAAATTATGTTGAGGTGATTCAGCTTAGTTCGAATTCGTTGACTGGAATGCTTCCTAACCAAACTACACAATTTTTGAGGTTGACTGAACTTAAGATATCTAATAACTCATTAGAAGGCAGTCTCCCGTCAGTCTTAGGAACGTACCCAGAACTAAAAGAGATTGATCTTGGCCACAACATACTTTCCGGGCCCCTCCTTCCGAGCTTTTTCACCTCGAACAAATTGACCGAGCTTAACCTCACACGCAACAACATTTCTGGATCGGTATCTTTTCAACAGATTCCGAATAACCCGCTAGTTTATGCTGAAAATTCTAGTCTTGTGTCTGTTGATCTCTCATACAACAACTTGAGTGGCTATCTACCTACAGAAATAAGTAAGCTTCACAATTTGGTAAGTCTCAATCTTTGTAACAACAAATTCGAAGGCGTTATTCCTGATGATATTCCTGATCAACTGAGAGAACTCAACGTGTCCTTCAACAATTTTTCTGGCATTGTGCCTGATAAGTTAATGAAGTTTCCTGAATCAGCGTTTCGCCCCGGAAATTCTTTTCTGATCTTTCCTCATTCGCTCGCTTCACCAGCAGATGGTGGTGAACTCGGGTTGAAGGAAAAGGGGCCACATATAAAATCCGCAACCAAGATTGCTTTGATCGCGAGTTTGGTTTCTGGCGCTTTTGTTATGGCCCTTCTGAGTGTAATAATTTTTTATAGGTTTCAGTGGAAAAAACAAACAACTAATCATCAAAATGGAGCGAAAGATGTTGCTTATCAGAGTTCTTCTCCATCTGGTAATGAAGTACCTAATAGAAACATAGAACCAATATCTTCAACCCAGAAGGGATCTGATAATGTCAAAAATGTTCATACTGCTGAAGAGCATACGAAAGATTTTGACTTTTCTGAATTGGTTAAGAATGAGGAAGGAATATCATCTCCAATGTCTTTTCTGTCATTTTCAAATCCTTCATCTTCTAGAAGCCACCCTTTTGAGAATCCTGGTGCTCTCAAAATATGCTCGCCAGATAAATTGTTCGGGGATTTGAATCTATTTGACGGGGCCTTGGAGCTCACTGCAGAAGAATTTTCTAGTGCTACAGCAGAAATTATCGGTAGGAGCTGTCATGGAACTCTGTATAAAGCTACGCTTAACTCGGGTCACATTTTGGCTGTCAAGTCATTAAGGGAAGGAATAGCCAAGAACAAAAAGGATTTTGCAAGGGAAGTTAAAAAACTTGGAACCATTAAGCATCCAAGTCTGGTTTCTCTTCAGGGTTACTACTTAGCTCCAAAGGAAACTGATAAATTCATTATATCCAATTATGTCAATGCACAGTCTTTGGACTTTTATCTGCATGATAGAAGGAATGGCCATCCAATGTCTCTGGATGAACGATCCTGGGTGGCTATAGCTGTGGCACAATGTCTGAATTACTTACACAATGAGAAAGCCATACCTCATGGCAATCTGAAATCCACAAACATCCTCCTTGAAATTCCTAACCACAATGTGCTGCTCACTGACTACAGCTTGCATCGGATACTTACATCCGCGGGTACTGCCGAGCAAGTTCGAAATGCAGGTTTTCTCGGTTACCGGCCTCCTGAATTTGCAAGCTCAAGCAAACCATGCCCATCTTTGAAGAGTGATGTATATGCATTTGGGGTGATCTTGTTAGAGCTTCTAACAGGAAGAGATTCCGGAGACATTGTTACAGGGGTCCCCGGCATCGTCGTCCTCGCAGACTGGGTGCAGTTCTTAGCGGAGCAAAACCGTGGTGGTGAGTGCTTTGACAGGCTGCTCTTGGACAGGCATGGTGGTGGTGGTGGTGGGGAACGCCAGCCTCGAGTTCTTGATGAAATTCTCAAGGTAGCCCTTAGATGCATACTTCCGGCATCAGAGAGGCCAGACATGCAGACGGTTTTTGTGGATCTTTCAACATTATTAAGGTGGTCACAGATTGATTCTAGGATACATATTAAATGGAAAGATGGTCATAGGTTGATTCCTGTAATGATTGTCTAG 3123 0.4169 MLMMLGVGASWEGMQAICSILFLYGVIVLGNSDIDALLQLKKSIRNDPSGLVNSWDSRSLASDGCPQNWYGIFCTEGNVISITLDNAGLVGEFNFLAINGLKMLRNLSLSNNQFTGSVSHFGPMESLEFLDLSVNKFHGLIPSDLLELHNIVYLNLSSNQFDGTVPVGFDKLKRLKYLDLCSNNFSGDIMHIFSHMGGVVHVDLSTNRFSGSLDLGLGNSLFLSSIQYLNVSHNSLTGDLFAHDGMPYLDSLEVFDASNNQLVGNIPSFTFVVSLRILWLGCNQLSGSLPEGLLKESSMVLSELDLSQNKLRGPVGSITSVTLKKLNLSSNKLSGPLPFKLGHCAIIDLSNNMLSGNLSRIQYWGNYVEVIQLSSNSLTGMLPNQTTQFLRLTELKISNNSLEGSLPSVLGTYPELKEIDLGHNILSGPLLPSFFTSNKLTELNLTRNNISGSVSFQQIPNNPLVYAENSSLVSVDLSYNNLSGYLPTEISKLHNLVSLNLCNNKFEGVIPDDIPDQLRELNVSFNNFSGIVPDKLMKFPESAFRPGNSFLIFPHSLASPADGGELGLKEKGPHIKSATKIALIASLVSGAFVMALLSVIIFYRFQWKKQTTNHQNGAKDVAYQSSSPSGNEVPNRNIEPISSTQKGSDNVKNVHTAEEHTKDFDFSELVKNEEGISSPMSFLSFSNPSSSRSHPFENPGALKICSPDKLFGDLNLFDGALELTAEEFSSATAEIIGRSCHGTLYKATLNSGHILAVKSLREGIAKNKKDFAREVKKLGTIKHPSLVSLQGYYLAPKETDKFIISNYVNAQSLDFYLHDRRNGHPMSLDERSWVAIAVAQCLNYLHNEKAIPHGNLKSTNILLEIPNHNVLLTDYSLHRILTSAGTAEQVRNAGFLGYRPPEFASSSKPCPSLKSDVYAFGVILLELLTGRDSGDIVTGVPGIVVLADWVQFLAEQNRGGECFDRLLLDRHGGGGGGERQPRVLDEILKVALRCILPASERPDMQTVFVDLSTLLRWSQIDSRIHIKWKDGHRLIPVMIV 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1621 1040 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Lele01g1621 1040 SMART LRR_typ_2 272 296 IPR003591 -
Lele01g1621 1040 SMART LRR_typ_2 101 123 IPR003591 -
Lele01g1621 1040 SMART LRR_typ_2 124 148 IPR003591 -
Lele01g1621 1040 SMART LRR_typ_2 223 243 IPR003591 -
Lele01g1621 1040 SMART LRR_typ_2 493 517 IPR003591 -
Lele01g1621 1040 FunFam Nuclear pore complex protein NUP107 30 191 - -
Lele01g1621 1040 SUPERFAMILY Protein kinase-like (PK-like) 733 1010 IPR011009 -
Lele01g1621 1040 FunFam Leucine-rich repeat receptor-like protein kinase 715 807 - -
Lele01g1621 1040 Gene3D Ribonuclease Inhibitor 32 196 IPR032675 -
Lele01g1621 1040 Pfam Protein tyrosine and serine/threonine kinase 734 931 IPR001245 GO:0004672|GO:0006468
Lele01g1621 1040 Gene3D Phosphorylase Kinase; domain 1 714 807 - -
Lele01g1621 1040 Pfam Leucine Rich repeat 437 452 IPR001611 GO:0005515
Lele01g1621 1040 MobiDBLite consensus disorder prediction 618 651 - -
Lele01g1621 1040 SUPERFAMILY L domain-like 32 315 - -
Lele01g1621 1040 Gene3D Transferase(Phosphotransferase) domain 1 809 1028 - -
Lele01g1621 1040 ProSiteProfiles Protein kinase domain profile. 730 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1621 1040 PANTHER OS07G0626500 PROTEIN 21 1014 - -
Lele01g1621 1040 SUPERFAMILY L domain-like 247 529 - -
Lele01g1621 1040 MobiDBLite consensus disorder prediction 618 653 - -
Lele01g1621 1040 Gene3D Ribonuclease Inhibitor 217 556 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1621 Lele-ChrLele01 11249659 11255306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1621 27 551 Receptor kinase-like Gene Family AT5G07280 30.862 2.64e-41 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele01g1621 PK_Tyr_Ser-Thr 7e-27 CL0016