Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1592 ATGGAGTCTCTATCCACATTGGCTATTAATCATGCTCAGATGGTTGGGACATGAAGTTCAAAGTCAAGTAAGACACAACAGAAATACAATTCTTCAGAAAAAAAAGCTGCTTCGCAAAGTTCAGCATCAAATCCTGACAGACCCATTTCCAATAATCTCAAGCCCTTTAGTTTCAATGATCTAAAGGAAGCTACCAAGAACTTTCGCGAAGAAAATTTTATTGGAGAGGGAGGTTTTGGGCGTGTCTTCAAGGGGTGGATTAACACTAGCACCTTTACTCCATCGAAACCAGGGAGTGGAGTGGTAGTGGCCATTAAGCAGCTCAAGCCAGAAAGCTTTCAAGGCCACAAGGAATGGCTTGCTGAAGTCAATTATCTAGGGCAGCTTCACCACGAAAATCTGGTGAAACTTATTGGTTATTGTTCAGAGGATAGAAATAGGCTTCTAGTTTATGAGTTCATGCAAAAAGGAAGCTTGGAGAATCATTTATTTCGAAGTGTTCAGCCCATACCTTGGGCAACGCGGATCAGTATTGCCATTGGTATTGCAAGAGGATTAGCATTCTTGCATGGCTTGGATGCAAATGTCATCTATCGTGATTTAAAGGCTTCTAACATCCTACTTGATTCGGATTTCAATCCAAAGCTTTCGGATTTCGGTTTGGCCAGAGATGGTCCTACTGGAGATAACACTCATGTTTCAACAAGAGTTCTTGGAACTCAAGGTTATGCTGCCCCAGAGTATGTAGCAACAGGTCACTTGACTCCAAGAAGTGATGTCTATAGCTTTGGTGTCGTCTTGCTAGAGTTGCTAACTGGGAGACGAGCATTAGAAGATGACAGACCCGGATCCATAGAAGAAACTCTGGTAGACTGGGCAAAACCATTCCTGACAGATAACCGGCGAGTTTTGAGGATCATGGATACAAGACTAGGTGGCCAATACTCCAAGAAAGGAGCTCAAGCTGCAGCTGCACTTGCATTGCAATGCTTGACCTCAGATCCTAGGTACAGACCTCCAATGGTGGATGTTCTTGCGGCATTGGAAGCTCTCAGTTCCTCAAGTTCAATTCCAAGGACCCCAAAATCTGACAGTGAGAGTGTTTCAAACAGATATTCTAGTTCTAGTCATCCACAACAAAAGCCAATCAGACATCTAAAGTCTGTCTGA 1170 0.4333 MESLSTLAINHAQMVGTXSSKSSKTQQKYNSSEKKAASQSSASNPDRPISNNLKPFSFNDLKEATKNFREENFIGEGGFGRVFKGWINTSTFTPSKPGSGVVVAIKQLKPESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSEDRNRLLVYEFMQKGSLENHLFRSVQPIPWATRISIAIGIARGLAFLHGLDANVIYRDLKASNILLDSDFNPKLSDFGLARDGPTGDNTHVSTRVLGTQGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRALEDDRPGSIEETLVDWAKPFLTDNRRVLRIMDTRLGGQYSKKGAQAAAALALQCLTSDPRYRPPMVDVLAALEALSSSSSIPRTPKSDSESVSNRYSSSSHPQQKPIRHLKSV 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1592 389 PANTHER OS01G0588500 PROTEIN-RELATED 32 351 - -
Lele01g1592 389 ProSiteProfiles Protein kinase domain profile. 68 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1592 389 Gene3D Phosphorylase Kinase; domain 1 37 153 - -
Lele01g1592 389 Pfam Protein tyrosine and serine/threonine kinase 72 346 IPR001245 GO:0004672|GO:0006468
Lele01g1592 389 MobiDBLite consensus disorder prediction 1 56 - -
Lele01g1592 389 MobiDBLite consensus disorder prediction 355 383 - -
Lele01g1592 389 MobiDBLite consensus disorder prediction 355 389 - -
Lele01g1592 389 SMART serkin_6 68 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1592 389 ProSitePatterns Protein kinases ATP-binding region signature. 74 106 IPR017441 GO:0005524
Lele01g1592 389 SUPERFAMILY Protein kinase-like (PK-like) 53 376 IPR011009 -
Lele01g1592 389 FunFam Serine/threonine-protein kinase BIK1 30 153 - -
Lele01g1592 389 CDD STKc_IRAK 74 344 - -
Lele01g1592 389 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 154 362 - -
Lele01g1592 389 Gene3D Transferase(Phosphotransferase) domain 1 154 374 - -
Lele01g1592 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1592 Lele-ChrLele01 10569383 10573354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1592 34 383 Glycoside Hydrolase AT3G07070 47.383 1.69e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele01g1592 PK_Tyr_Ser-Thr 7.6e-47 CL0016