Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1579 ATGAGGAAGAAACTCGATACTCGTTTCCCTGCTGCTCGGATTAAGAAAATTATGCAATCGGATGAGGATGTAGGGAAGATTGCCATGGCCGTGCCTCTTCTTGTTTCTAAAGCACTAGAACTCTTTCTGCAAAATTTATGTGATCGGACATATGACATAACATTGAGAAGAGGGGCAAAGACAATGAATTCTTATCATTTAAAACAATGTGTACAGAGTTTTAACGTCTTCGATTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGTGGCTACGCTGCATCTGGAGATGACCGTACTGCCTGCAAGAGAAGGAAAGTTGGTGACGATGGAAATGACAGTGATGATGACGCAAAAAGAAATAAGATGCCAGAAAATGCTCATCATGCTGGTGGTAGGGGAAGAGGTCGTGGCAGAGGTAGGGGTCGTGGCAGAGGAAGTAGAACAACAGATCGAGAGAATAATGCACATGTCAAGTCTGAAGATGATGATGATGATTATCATCATCCTGATGCATCGAAGCACCATGACTGGCGCAGTCACAGCAATGAAAGCATGGAAACTAGTACAGAACATGAAGTGAAGCCTTCCATTAGCAAGACATCGGAAGCATGCATGAGAAATTTCGACTTAAATATGGATCCTGTGGTGGAGGAGGACAGCAATTCGCCAACCAGCATAGCTCCTGTCCCACCTTGTCCACCCGAAAAACCAACCACAACTCGTCCCCCGGAAAAACCAACCACAACTTGTCCATCTGAAAAACCAACCACCGTAGAATTGAGGCACGAAGAAATCCCGGGGTGGTCACTATCCGACGTGGAAAAAATGGCCATTGATACTATCCAACTGGTCAACATGAATGGAAGGATGGATGAAGAAGATGAAGATTATGATGAAGAATATTGA 912 0.4397 MRKKLDTRFPAARIKKIMQSDEDVGKIAMAVPLLVSKALELFLQNLCDRTYDITLRRGAKTMNSYHLKQCVQSFNVFDFLKDIVSKVPDLGGYAASGDDRTACKRRKVGDDGNDSDDDAKRNKMPENAHHAGGRGRGRGRGRGRGRGSRTTDRENNAHVKSEDDDDDYHHPDASKHHDWRSHSNESMETSTEHEVKPSISKTSEACMRNFDLNMDPVVEEDSNSPTSIAPVPPCPPEKPTTTRPPEKPTTTCPSEKPTTVELRHEEIPGWSLSDVEKMAIDTIQLVNMNGRMDEEDEDYDEEY 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1579 303 MobiDBLite consensus disorder prediction 103 133 - -
Lele01g1579 303 MobiDBLite consensus disorder prediction 103 262 - -
Lele01g1579 303 MobiDBLite consensus disorder prediction 145 199 - -
Lele01g1579 303 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 125 - -
Lele01g1579 303 MobiDBLite consensus disorder prediction 228 243 - -
Lele01g1579 303 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Lele01g1579 303 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Lele01g1579 303 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Lele01g1579 303 FunFam dr1-associated corepressor homolog 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1579 Lele-ChrLele01 10436286 10439096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1579 1 126 CCAAT-HAP5 Transcription Factor Family AT3G12480 66.917 1.72e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele01g1579 CBFD_NFYB_HMF 2.3e-18 CL0012