Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1553 ATGCTGAGAGCTTCACATTTTCCGATGGTAGCGTCTCCAGCTGTCGGTGCTCTGAGGCTATCTCTGATTACCGTTCGCTCCCTCTCATCTCCTTCCAATATTCGATCCTTCTTCACTTGTTGTACATCTCGCAGGGTTTCCTCTCATAGATTTCGCGCTTGTTCGCATCCTCTTAATTCCTTCACTTTCAAGCAACTGCTTCCTCCAATAGGGTTGTCGCGCCCCCAAGTAGCAGCTCTATGCAGCAGCAGCAGTGCTGAACCTGAAGCTGCTAGGGAGATCCTGGTGCAACACTTACTTGTTAAAGAAGATGACCAGAAGCTACTGTTGGATCTTCAGCAGAGAATCTCATCAGGTGAAGACTTGAGTGATCTTGCCGTAGAATACTCAATGTGCCCATCTAAAGAAGAAGGAGGAATGCTTGGGTGGGTGAGAAAGGGGCAAATGGTTCCTGAATTTGAGGAAGCTGCGTTCAATGCACCTTTAAACAAAGTTGTAAGGTGCAAAACAAAATTTGGATGGCACCTTCTTCAAGTTTTATCTGAAAGGGAAGAATCTATTCTTCAAGACATTCAACCTGATGAGCTTCATACGAAAATTCAAGATCCCAACTTTATGGAGGAGGCACAATTGATTGATGTTCGAGAGCCTGAGGAAGTGGAGAAAGCATCTCTACCAGGTTTTAAGGTTCTTCCCCTCCGACAATTTGGAAATTGGGGACCTGATATCACTAGCACATTTGATCCTAACAAGGATACATATGTTTTGTGTCATCATGGCATGCGGTCCTTGCAAGTTGGCAAGTGGTTGCAGTCACAGGGATTTAGAAGAGTATACAGTGTATCTGGGGGAATCCATGCATATGCTCTGAAGGTTGATCCATCTGTCCCTACTTACTAG 900 0.4511 MLRASHFPMVASPAVGALRLSLITVRSLSSPSNIRSFFTCCTSRRVSSHRFRACSHPLNSFTFKQLLPPIGLSRPQVAALCSSSSAEPEAAREILVQHLLVKEDDQKLLLDLQQRISSGEDLSDLAVEYSMCPSKEEGGMLGWVRKGQMVPEFEEAAFNAPLNKVVRCKTKFGWHLLQVLSEREESILQDIQPDELHTKIQDPNFMEEAQLIDVREPEEVEKASLPGFKVLPLRQFGNWGPDITSTFDPNKDTYVLCHHGMRSLQVGKWLQSQGFRRVYSVSGGIHAYALKVDPSVPTY 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1553 299 SMART rhod_4 191 294 IPR001763 -
Lele01g1553 299 ProSiteProfiles Rhodanese domain profile. 205 297 IPR001763 -
Lele01g1553 299 Gene3D - 89 184 IPR046357 GO:0003755
Lele01g1553 299 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 299 - -
Lele01g1553 299 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 91 181 IPR000297 GO:0003755
Lele01g1553 299 Pfam PPIC-type PPIASE domain 96 181 - -
Lele01g1553 299 Pfam Rhodanese-like domain 193 290 IPR001763 -
Lele01g1553 299 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 187 297 IPR036873 -
Lele01g1553 299 Gene3D - 185 296 IPR036873 -
Lele01g1553 299 SUPERFAMILY FKBP-like 92 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1553 Lele-ChrLele01 10128983 10131700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1553 18 299 Sulfurtransferasese or Rhodanese AT5G19370 58.392 4.47e-108 314