Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1541 ATGGATCTTGTAAGCATTAGTCCCTTCAACAATCCCTACCTCGCCGCCGGGGATTCCTTCTCAGGCGCCGAGGAACCCTCCACCGGCAACAACCATGTTCTCCGGCCACCAAAAAGACCCGTGGGAAGACCCAAGGGTTCAAAGAACAAGCCCAAGGCTGTCAGGGATATCCCCGCCGGCGAACCCACTGACAATAAACACATTCTCCGGCAAGTAAAAAGACCCGTTGGAAGACCCAAGGGCTCAAAGAACAAGCCCAAGACGGTAGCACAAGCTATCGAGGCCATATCTTTAAACTCGCAGATCGTCATCGAAATCCCCGCCGGCGACAACGTGGTACAGTCGCTGCTCCAGTTATGTCACTGCTACAACGTCTCCGTCACCGTGTTAAGTGCTTCCGGTGAACTTGCTGAGATCATCCCCCTCAACGAACCAAACTTCTCCATCCCTGGACCTTACCCGATACTGTCTCTTTCCTGTACCGTCGTGCCAACCCCACCACCACCGTCTGCTGTCATAAACTCGCCGGAGATTAGTTTTCCCTTTGTGGTTGTTCTTTCTATGCCCGATGGTGCTGCATTGGGAGGAATAGTAGCAAGAAGTGCCAAGGCGGCGAGCATGGTGAAGGTGGTGGCGATGACTACGGCGCTTAACAATGTGACGTTTGAGACTAACAACACAGACGTAGAAATTACACCGTTGAACGATATACGTCCTGAGAGTATTCAGTTCAATGAGTTTCTTCAATCTCTTATCTCCGGCGATCTCATGAAGAATCAGATACACGAAAATGAAAAAGAACAAGAACAGGATCAGATGATGAAGAAGACGAATAATGCGTGGATGATTGATGAGGATATTTGGCGATTTGAGGAAAATCTGACTCCTGCTTTAAGGGTTGAACCATATTTCACTTCATCCTAA 924 0.4924 MDLVSISPFNNPYLAAGDSFSGAEEPSTGNNHVLRPPKRPVGRPKGSKNKPKAVRDIPAGEPTDNKHILRQVKRPVGRPKGSKNKPKTVAQAIEAISLNSQIVIEIPAGDNVVQSLLQLCHCYNVSVTVLSASGELAEIIPLNEPNFSIPGPYPILSLSCTVVPTPPPPSAVINSPEISFPFVVVLSMPDGAALGGIVARSAKAASMVKVVAMTTALNNVTFETNNTDVEITPLNDIRPESIQFNEFLQSLISGDLMKNQIHENEKEQEQDQMMKKTNNAWMIDEDIWRFEENLTPALRVEPYFTSS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1541 307 MobiDBLite consensus disorder prediction 18 87 - -
Lele01g1541 307 MobiDBLite consensus disorder prediction 49 71 - -
Lele01g1541 307 Coils Coil 259 279 - -
Lele01g1541 307 SUPERFAMILY AF0104/ALDC/Ptd012-like 100 215 - -
Lele01g1541 307 Pfam Plants and Prokaryotes Conserved (PCC) domain 102 214 IPR005175 -
Lele01g1541 307 Gene3D - 100 234 - -
Lele01g1541 307 ProSiteProfiles PPC domain profile profile. 96 240 IPR005175 -
Lele01g1541 307 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 67 272 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1541 Lele-ChrLele01 10005790 10006713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1541 62 223 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.118 2.95e-18 81.3