Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1536 ATGTACAAGAGTAAGAAGAAAGTTGTGGCTACCGCAAGGAGGTTGCCTTCTGATTCTGGCGCTTTTGCTGATTGGGCGGCTTCTTCTGCCGGCCGTGCTGCCCCCGCCGATGAGCTGTCCCTCGGCTTCAATGCTGGACCTGCCGCCGGGGGACCTGCCGCTGGTCCCACATCAGGAATGTGGTCTGGTGCTGCCCCCGCTGCGAGGTCGATCAATTACGGTTATTCGCAGGAGATGGGCGGCATGCTCGGCCTCCGCGATCTCTACGTAGTGGCGCCGGCGTCGTCGTTTCACCACCACCACCACCATCACCATGACCAGTCAGGCGTCATGACCGGTCCTCATTCGGAGAACAGCTCGAACCGCGCACCTGCTCTCGGCGTCGGCGTTATTCCTCTACTCACCGCCACATCGTGTCTTGGCCCGGCTAACATCACCGCCGAGAACAACGAGACAACTTTGATGAGTAATCGAAGCCGAGGTGGGGCAATTCAGCTGTGGCAGGACCAGGAGTCTGCACATGGTCATTATTTGAAGAAACAAGGTATTACGACGTTTGAGCTCAACGACAGTTCTGGGAATCTGGTTCAGAACGAGAATGGATTAGCCATCTCCGCAGCGAACAGCGGCGGCGGAGTAACGTGTCAGGACTGTGGGAACCAAGCGAAGAAGGATTGTAGCTACGGAAGGTGTAGAACTTGCTGCAAGAGTCGGAATTATGACTGCCATACTCACGTGAAGAGCACGTGGGTGCCGGAGTCTCGGCGGAGAGATCGCCGTCTGATGGCCGCAGCGACCACTGCCGGTGGATCCACCGGTGCTACTTCTGGTGTCAAGAAACCTAGACTCGTCACATCACAACGACAAACCACAACAAACTCTCACACTTCCACATCTAATACCACTCCTCCTAGAAGCTTCGACACTGGTTCTAGCCACCAAGATGCAGGGTTTAAGGAATCACTACCGGGACAAGTCCGAGCTCCAGCGGTGTTCAAATGTGTTCGGGTTACAGCAGTGGACGAAGCCGGGCAGGATGAGTTTGCTTATCAGGTTACTGTCAAGATTTGTGGCCATGTTTTCAAAGGGTGTCTGTATGATCAAGGGGTTGAAAGTAGAGATGTGTATCCGAATTTGTCGGAGCTTCATCTCGGCGGCGGTTCTGCCGCTGCCGGGAATGGTGGGAGGAATGGGGCTTCATCTTCATCACCAATGATGGATCCTTCTGATGTATATGCAGCTTCAGGTGGAGGAGGTGGCTTACTTGGAGGAGGATCAACTTATGGTAATCCAATAAATTAA 1302 0.5422 MYKSKKKVVATARRLPSDSGAFADWAASSAGRAAPADELSLGFNAGPAAGGPAAGPTSGMWSGAAPAARSINYGYSQEMGGMLGLRDLYVVAPASSFHHHHHHHHDQSGVMTGPHSENSSNRAPALGVGVIPLLTATSCLGPANITAENNETTLMSNRSRGGAIQLWQDQESAHGHYLKKQGITTFELNDSSGNLVQNENGLAISAANSGGGVTCQDCGNQAKKDCSYGRCRTCCKSRNYDCHTHVKSTWVPESRRRDRRLMAAATTAGGSTGATSGVKKPRLVTSQRQTTTNSHTSTSNTTPPRSFDTGSSHQDAGFKESLPGQVRAPAVFKCVRVTAVDEAGQDEFAYQVTVKICGHVFKGCLYDQGVESRDVYPNLSELHLGGGSAAAGNGGRNGASSSSPMMDPSDVYAASGGGGGLLGGGSTYGNPIN 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1536 433 MobiDBLite consensus disorder prediction 268 318 - -
Lele01g1536 433 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 214 256 IPR006510 -
Lele01g1536 433 MobiDBLite consensus disorder prediction 265 321 - -
Lele01g1536 433 MobiDBLite consensus disorder prediction 387 407 - -
Lele01g1536 433 Pfam Domain of unknown function (DUF702) 212 371 - -
Lele01g1536 433 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 322 370 IPR006511 -
Lele01g1536 433 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 96 415 IPR007818 GO:0003700|GO:0006355
Lele01g1536 433 MobiDBLite consensus disorder prediction 99 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1536 Lele-ChrLele01 9969364 9971370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1536 1 411 C2H2 Transcription Factor Family AT5G12330 47.196 2.12e-93 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele01g1536 DUF702 2.4e-54 No_clan