Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1534 ATGTTGTTCGTGTTAGAGATTTGGGCTCTCTGCAAATTACTATCGGAAGAGAATAAAGGCTCTATGGAGAACAATAAGAAGAGAAAACTCAAAACACCTGCTCAGGTTTATGGTCTGGAGAAATTTTATAACGACCACAAATATCCCACTGAGGAAATGAAATCAGAACTTGCTGAGGTGTTGGGGTTGACAGAAAAACAAGTATCTGGATGGTTTTGCCATCGAAGGCTAAAAGATAAAAGGTTGTTGAAAGATGAAGCCTGTGCTAATGGGCGACAAGATATTTCTAGTGGTGTCATCCAAGATCATGGAAGTGGATTAGGGCAAGATTCATGTGGAAGCACTAAACATGGTGATTATAGGCATATTGATCCCAAAGAGGTTGAGAGTCATGGCCTTTATGGTGGTCGTGATCTTTTAGTTTCAGATACTGCTTATGAACGTAGGAATCGTTATTCAGAAAATGTTTGTGCAATGGAAGACACATCATCTGAGAGAAGCTCATCTTTGCAAAATGAGGATTCATATGACGCTGAGCCTTCTGGGTATCGCACACCTGATGGAGCTCTGCCAACTAAAGTTCCCAAGCCTGCCACAAACACGAGATATAAACCTTCAGGCTATCTTAAAGTAAAAGGAGAGATAGAAAACCCTGTTATAACTGCTGTTAAGAAGCAATTAGGAAGAAATTATCGGGAAGATGGTCCGCTTCTTAGTATAGAATTTGATCCACTTCCTCCAGTAGCATTCGAGTGTAAAATTGCAGATCCATTTCATGAAACATACTATATGGCAAATCGTGCTCCCTATTCTCCTGACATTTCTGCTGTGAAAAGGCAACCCAGTCTTTGTGCTGGATATGATTCATATAATACCAAATTCAATTCCCAAGATTCACATATGGAAGGAGAAGACCTCTGTGATTTCCAGGATAAGAAACCTTACCAGCATTCAAAGCAAAGGCCACCTTTGTACAGTCATACCTTTCGATTTCCTAGCAGAAACTCTTCACTCGATTTGTACGAACATTCTATTGGAGAATCACATGCATATAATAGCAAAGAGAATCGTAGAGTTGGCATCAATCATGGCTTTGAAGGATTGAAATCCGATTCTGCTTCTAATCATAGTGATCACTATGATGGTAACCATGCGGCAAACCCAAAAGATCCACTGTTGCATGGATATGATAACATCAATGCGAAGAATGTTCAGAGTGACTATGGAAAACTTGAGCCATCAAACTCGATCAGGAATCCTCTTGTTTCTATGGATGCTAAGGATAGAGGAGGCCTATCCAGTAGGATGATAAAGGAAAAGAAGTCTGGTGAAAAAAGAAAGGCAAGAAAACAATGCGATGATCCAGATGGATTAAGGATGCTTTCGCACGAGGCTGCAAAACGTCTTGTTGATCCTCCTCTACAATATAATGTTATAGAAGAACATGTTGCTGAGATGCAACCACATAAAAGCCAGAGATCTTCTATGGAAGTATCATCAAGCTTTAGTGAGGATGAAGCTGCGATTCCCAGCTCATCTCTCGATGAAGCGATCGGTTTCCAGTGA 1566 0.4049 MLFVLEIWALCKLLSEENKGSMENNKKRKLKTPAQVYGLEKFYNDHKYPTEEMKSELAEVLGLTEKQVSGWFCHRRLKDKRLLKDEACANGRQDISSGVIQDHGSGLGQDSCGSTKHGDYRHIDPKEVESHGLYGGRDLLVSDTAYERRNRYSENVCAMEDTSSERSSSLQNEDSYDAEPSGYRTPDGALPTKVPKPATNTRYKPSGYLKVKGEIENPVITAVKKQLGRNYREDGPLLSIEFDPLPPVAFECKIADPFHETYYMANRAPYSPDISAVKRQPSLCAGYDSYNTKFNSQDSHMEGEDLCDFQDKKPYQHSKQRPPLYSHTFRFPSRNSSLDLYEHSIGESHAYNSKENRRVGINHGFEGLKSDSASNHSDHYDGNHAANPKDPLLHGYDNINAKNVQSDYGKLEPSNSIRNPLVSMDAKDRGGLSSRMIKEKKSGEKRKARKQCDDPDGLRMLSHEAAKRLVDPPLQYNVIEEHVAEMQPHKSQRSSMEVSSSFSEDEAAIPSSSLDEAIGFQ 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1534 521 MobiDBLite consensus disorder prediction 406 459 - -
Lele01g1534 521 MobiDBLite consensus disorder prediction 157 178 - -
Lele01g1534 521 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 12 515 - -
Lele01g1534 521 SMART HOX_1 24 86 IPR001356 GO:0003677
Lele01g1534 521 MobiDBLite consensus disorder prediction 367 393 - -
Lele01g1534 521 CDD homeodomain 26 81 IPR001356 GO:0003677
Lele01g1534 521 ProSiteProfiles 'Homeobox' domain profile. 22 82 IPR001356 GO:0003677
Lele01g1534 521 MobiDBLite consensus disorder prediction 484 521 - -
Lele01g1534 521 Pfam Homeodomain 26 81 IPR001356 GO:0003677
Lele01g1534 521 MobiDBLite consensus disorder prediction 406 421 - -
Lele01g1534 521 MobiDBLite consensus disorder prediction 489 508 - -
Lele01g1534 521 MobiDBLite consensus disorder prediction 431 459 - -
Lele01g1534 521 MobiDBLite consensus disorder prediction 157 205 - -
Lele01g1534 521 Gene3D - 15 97 - -
Lele01g1534 521 SUPERFAMILY Homeodomain-like 24 91 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1534 Lele-ChrLele01 9922819 9927697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1534 18 515 Homeobox Transcription Factor Family AT4G03250 38.123 3.60e-74 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele01g1534 Homeodomain 3.2e-16 CL0123