Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1524 ATGCATCATGGTTGTTCAATTCCTATTATTCATCGTGACATATCGAGCAAGAATATTCTTCTAAGTTCTGAATATGAAGAAGCTCACATCATCGACTTTGGAACGGCGAAGTTTTTGAATCCTAACTCAAACAATATAACCGCATTTGCTGGCACATTTGGGTATGCTGCACCAGAGATGGCTTTCATCATGGAAGCGAATGAGAAATGTGATGTATTCAGCTTTGGAGTGTTGACTTTAGAAATCATTATGGGTACACATCCAGCAGAGCTTATTTCATCTTTGGTGGAAAATTTAACCAATATCAGTGATTTGTTGTTAAAGGATGTGTTGGACCCACGACTTTCTGCCCTCACAAAACCAATCCTAGATGATGTGATCTTAGTTGCAAAAATAGCTTTTTCTTGCTTGAATAAGACTCCTCGGTCTCGTCCTACCATGGAACAAATATCAACACAGTTTGCAAGGACACCAAAATCTTATTCTGAGGTTGAATTTCACACCATCACAATTGGACAACTAATGAGGGATTGA 534 0.3858 MHHGCSIPIIHRDISSKNILLSSEYEEAHIIDFGTAKFLNPNSNNITAFAGTFGYAAPEMAFIMEANEKCDVFSFGVLTLEIIMGTHPAELISSLVENLTNISDLLLKDVLDPRLSALTKPILDDVILVAKIAFSCLNKTPRSRPTMEQISTQFARTPKSYSEVEFHTITIGQLMRD 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1524 177 Pfam Protein kinase domain 8 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1524 177 PANTHER LEUCINE RICH REPEAT KINASE 2 1 157 - -
Lele01g1524 177 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Lele01g1524 177 SMART serkin_6 1 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1524 177 SUPERFAMILY Protein kinase-like (PK-like) 1 151 IPR011009 -
Lele01g1524 177 Gene3D Transferase(Phosphotransferase) domain 1 1 170 - -
Lele01g1524 177 ProSiteProfiles Protein kinase domain profile. 1 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1524 Lele-ChrLele01 9728386 9728997 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1524 1 164 Receptor kinase-like Gene Family AT1G75820 38.983 3.62e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele01g1524 Pkinase 7.5e-22 CL0016