Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1523 ATGGATTTACATGACATTAAATCTATTGCAGAGATGGCTTTCATCATGGAAGCGAATGAGAAATGTGATGTATTCAGCTTTGGAGTGTTGACTTTAGAAATCATTATGGGTACACATCCAGCAGAGCTTATTTCATCTTTGGTGGAAAATTTAACCAATATCAGTGATTTGTTGTTAAAGGATGTGTTGGACCCACGACTTTCTGCCCTCACAAAACCAATCCTAGATGATGTGATCTTAGTTGCAAAAATAGCTTTTTCTTGCTTGAATAAGACTCCTCGGTCTCGTCCTACCATGGAACAAATATCAACACAGTTTGCAAGGACGCCAAAATCTTATTCTGAGGTTGAATTTCACACCATCACAATTGGACAACTAATGAGGGATTGA 390 0.3795 MDLHDIKSIAEMAFIMEANEKCDVFSFGVLTLEIIMGTHPAELISSLVENLTNISDLLLKDVLDPRLSALTKPILDDVILVAKIAFSCLNKTPRSRPTMEQISTQFARTPKSYSEVEFHTITIGQLMRD 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1523 129 PANTHER LEUCINE RICH REPEAT KINASE 2 11 109 - -
Lele01g1523 129 Pfam Protein tyrosine and serine/threonine kinase 11 105 IPR001245 GO:0004672|GO:0006468
Lele01g1523 129 Gene3D Transferase(Phosphotransferase) domain 1 9 108 - -
Lele01g1523 129 SUPERFAMILY Protein kinase-like (PK-like) 13 103 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1523 Lele-ChrLele01 9673442 9673831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1523 15 110 Receptor kinase-like Gene Family AT2G01210 34.314 4.35e-13 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele01g1523 PK_Tyr_Ser-Thr 4.4e-06 CL0016