Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1515 ATGTATCCACGAGTGCTTTTGGCTAAAACTGAGAAGACCCTTTTGCCCAGGATAAGGTTTCTCCAGTCAATCGGGTGTACAAGTTCTGAACTCCAAGATCTCCTCATTTCACAATATGATTTCCTCAAGTTGAGCTTAGAACAAAGTATAATCCCTTGTTATGAGGCCAAGGGTTTTCTTGATGCGATGAGGTATGGTTGGACCGGAGATGTCACTCTTTCAGTCTTCAACAAATGTCCACAATGCTTGATGCTGTCTGACGAGAATATCACAAAGTCAATGTCGTTTCTTATGGATGAAGTGGGTATGCCCTTGAAAGATATAGCTAGACGCCCATTGTTACATGTTTATAGTTTGGAGCAGAGGATGATTCCTCGATACTCAGTAATTCAAGATCTTTACCTGAAGTTCGGTGATATTAGTTTCTTGGAGGGTGCTAATGTGTGTATTCATTTCTCAGAAGAAGATGCTAAGACAGATGATTTTGATTGGATAAAGGAGCAAAGTGTGGCAATGGAAGTAAATGCTAAAAGATTTTGGTGA 543 0.4015 MYPRVLLAKTEKTLLPRIRFLQSIGCTSSELQDLLISQYDFLKLSLEQSIIPCYEAKGFLDAMRYGWTGDVTLSVFNKCPQCLMLSDENITKSMSFLMDEVGMPLKDIARRPLLHVYSLEQRMIPRYSVIQDLYLKFGDISFLEGANVCIHFSEEDAKTDDFDWIKEQSVAMEVNAKRFW 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1515 180 Gene3D Transcription termination factor 3, mitochondrial 1 146 IPR038538 -
Lele01g1515 180 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Lele01g1515 180 SMART mt_12 73 104 IPR003690 GO:0003690|GO:0006355
Lele01g1515 180 SMART mt_12 1 27 IPR003690 GO:0003690|GO:0006355
Lele01g1515 180 Pfam mTERF 65 132 IPR003690 GO:0003690|GO:0006355
Lele01g1515 180 PANTHER CGI-12 PROTEIN-RELATED 61 144 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1515 Lele-ChrLele01 9517519 9519287 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele01g1515 mTERF 7.5e-12 No_clan