Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1505 ATGCTGACTTTTCTGATTTCAAGGTTATCTTCGTCCCTGCCATGCGGGACGAGAACTCAATTAGGGTTTCTCCGTCTCAATGCTTCCCACATCTCTTATTCGTTTTCTCCTGTGGTGAAATCATCTGAATCAAATAATTCCGAACAAAATCTAGTCGGAGGCCAGTCGTTTACGGTTTCTTACCTCATCAACTCTTGTGGCATGTCCCCAAGAGATGCTAAAGAATTATCGAACAAGGTTAAACTGAATGGCCCAGATAAACCCGACTCGGTACTTCAACTTCTAAGAAGCTACGGATTCTCAGATATTCAGATATCCAAAGTTGTGAAATGCATTCCACGAGTGCTTTTGGCAAGGCCTGAAAATAACCTTTTGCCCAAGCTAAGGTTCTTCCAGTCTATAGGGTTGTCAGCTGAGCTCCTCTCCTCTAACCCTAGGTTACTAAGTACAAGCTTAGAGAACCGTATAATTCCCCATTATGAGGTCCTTAAAAGTGTTCTTGGTGATGATTGGAAAGCAATGGTGTGTTTAAAAAACTCAAGGTGGAATTGTTACCACTATGACTATGGTGTAACGAATATATTTCCAAACATAAAGGTTTTGAGAGGTAAAGGAGTCCCTCAATCTTCTGTCTTTACTCTGTTATCTAAATGTGCAGCTGTAGCATTTATGGATCACTCAATGTTTGTTGAATATGTCAAGTTTGTCGAGGATAACGGAATCGATCCTTTCAAGGTTAAGTTCGTTCATGCACTCTTGGTTGTAACACAATTGAATAAATCAGCCTGGGAGATGAAACTGGGTATGTTCAATAGGTGTGGCTGGTCCAGAGATGTCACTCTTTCAGCATTCAGTAGGTTTCCAGTGATCATGAACTTGTCAGAGGAAAAAGTCTCAAACTCAGTGAGGTTTTTTGTGGATGAAATGGGTTTACAGTTGGAAGATATAGCTGGATGCCCAACAATTCTTGGCTATAACTTGAAGCAGAGGATTATTCCTAGATGGTCAGTATTTCGAATTTTGAAAATGAAGGGTTTAATCAAGGCGAATATGTCCAAACCTTCCATGATTATTATCAGTGAGAAAAAGTTTCTGGAAAATTTTTTTGATCAAGTTTCAGGAAAGTGTTCCTAA 1134 0.3977 MLTFLISRLSSSLPCGTRTQLGFLRLNASHISYSFSPVVKSSESNNSEQNLVGGQSFTVSYLINSCGMSPRDAKELSNKVKLNGPDKPDSVLQLLRSYGFSDIQISKVVKCIPRVLLARPENNLLPKLRFFQSIGLSAELLSSNPRLLSTSLENRIIPHYEVLKSVLGDDWKAMVCLKNSRWNCYHYDYGVTNIFPNIKVLRGKGVPQSSVFTLLSKCAAVAFMDHSMFVEYVKFVEDNGIDPFKVKFVHALLVVTQLNKSAWEMKLGMFNRCGWSRDVTLSAFSRFPVIMNLSEEKVSNSVRFFVDEMGLQLEDIAGCPTILGYNLKQRIIPRWSVFRILKMKGLIKANMSKPSMIIISEKKFLENFFDQVSGKCS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1505 377 Gene3D Transcription termination factor 3, mitochondrial 176 372 IPR038538 -
Lele01g1505 377 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Lele01g1505 377 SMART mt_12 29 69 IPR003690 GO:0003690|GO:0006355
Lele01g1505 377 SMART mt_12 138 170 IPR003690 GO:0003690|GO:0006355
Lele01g1505 377 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Lele01g1505 377 SMART mt_12 212 242 IPR003690 GO:0003690|GO:0006355
Lele01g1505 377 SMART mt_12 313 344 IPR003690 GO:0003690|GO:0006355
Lele01g1505 377 Pfam mTERF 258 365 IPR003690 GO:0003690|GO:0006355
Lele01g1505 377 Pfam mTERF 92 252 IPR003690 GO:0003690|GO:0006355
Lele01g1505 377 FunFam Mitochondrial transcription termination factor-like 156 375 - -
Lele01g1505 377 PANTHER CGI-12 PROTEIN-RELATED 55 370 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1505 Lele-ChrLele01 9434021 9435154 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele01g1505 mTERF 6.7e-16 No_clan