Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1503 ATGCTACATTTTCTGATTGCAAGATTATCTTTGTCGCGGGCATGCTGGCGGACAACCGAGTTAGGGTTTCTTCGTCGCAATGCTTATCACATTTCTTATTCGTTGTCTTCTGTCGCGAAATTATCTCAATCAAATCCACCAGAACAAAACAGAGATGGAAATTTTACTTTTACGGTTTCCTACTTCGCGAACACATTTGGCTTGTCCGCTGAAGTTGCTGGTAAATTATCGAAAAGGTTTGAGCTGAAAGACCCAGATAAACCCGACTCCGTGCTGATTCTTCTCAGAAGCTACGGATTCTCAGATACTCAGATATCCAAAATTGTGAAATGCTTTCCCCAAGTGCTTGTAGCAAATCCTGAACAGAGTCTTTTGCCCAAACTGAGGTTTATCCGTTCTATTGGATTTTCAGCTTCTGAACTCACAGAACTATTCTCGTATAACCCTACATTACTATTTTTAAGCTTAGAGAGACGTATAATTCCCCACTATGAGGCCCTTAAAGGGGTACTTGGTGATGATTGGAAAGTAAAGAGATGTTTGAAAGGCTCAATGTTGAGCGTTTCCTCCTATGATGTAACGAATTTAGTTCCAAACATAAAGGTTTTGAGAGATGAAGGAGTGCCTCAATCTTCTGTCTTTACTCTGTTATCTAGAACTGCAAATGTAGCATTTATCAATCAATCAAAGTTTGTTGATAATGTCCAGTTTGTCAAGAAAACAGGAATTGAACCTGTCAAGGGTGCGTTCATTGAGGCACTTGCAACTGTAACACTGGTGGGTAAATCATCCTGGGAATTAAAACTGGGTATCTATGAGAGGTTGGGATGGTCCAGGGATGTCACCCTTTTGGCATTCAGGAAGTTTCCAAGCATCATGCGTATGTCAGAGGAAAAAGTCACAAACACTATGAAGTTTTTTGTGGATGAAATGGGTTTACAGTTGGAAGATATAGCTGCATGCCCAACAATTTTAAGCTATAGTTTGAAGCAGAGGATTATTCCTAGATGGTCAGTAGTTAAAATTTTGAAAATGAAGGGATTAATCAAGGACAATGGTTTCATCATCACAATGCATGCCACATTTCCCATTGGTTTTATACGGTTGCGAAATCATCTTCAGTCAAGTCCAACAGAACAAAATAGAGATGTAAAATTTTCTTTTACGGTTTCTTACCTCATGAATTCACTTGGCATGTCTGCCAAAGTTGCTGGTAAATTATCGAAGAAGTTTGAACTGAAAGACCCAGATAAAGCCGACTCCGTACTTAGTCTTCTCAGAAGCCACGGATGCTCAGATATGCAAAATTGTGAAATGGTTTCCCACAGTGCTTTAGGGAAATCCTGA 1347 0.3972 MLHFLIARLSLSRACWRTTELGFLRRNAYHISYSLSSVAKLSQSNPPEQNRDGNFTFTVSYFANTFGLSAEVAGKLSKRFELKDPDKPDSVLILLRSYGFSDTQISKIVKCFPQVLVANPEQSLLPKLRFIRSIGFSASELTELFSYNPTLLFLSLERRIIPHYEALKGVLGDDWKVKRCLKGSMLSVSSYDVTNLVPNIKVLRDEGVPQSSVFTLLSRTANVAFINQSKFVDNVQFVKKTGIEPVKGAFIEALATVTLVGKSSWELKLGIYERLGWSRDVTLLAFRKFPSIMRMSEEKVTNTMKFFVDEMGLQLEDIAACPTILSYSLKQRIIPRWSVVKILKMKGLIKDNGFIITMHATFPIGFIRLRNHLQSSPTEQNRDVKFSFTVSYLMNSLGMSAKVAGKLSKKFELKDPDKADSVLSLLRSHGCSDMQNCEMVSHSALGKS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1503 448 Gene3D Transcription termination factor 3, mitochondrial 176 361 IPR038538 -
Lele01g1503 448 PANTHER CGI-12 PROTEIN-RELATED 387 435 IPR003690 GO:0003690|GO:0006355
Lele01g1503 448 FunFam Mitochondrial transcription termination factor-like 156 362 - -
Lele01g1503 448 SMART mt_12 142 174 IPR003690 GO:0003690|GO:0006355
Lele01g1503 448 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Lele01g1503 448 SMART mt_12 183 209 IPR003690 GO:0003690|GO:0006355
Lele01g1503 448 SMART mt_12 214 244 IPR003690 GO:0003690|GO:0006355
Lele01g1503 448 SMART mt_12 106 137 IPR003690 GO:0003690|GO:0006355
Lele01g1503 448 SMART mt_12 315 346 IPR003690 GO:0003690|GO:0006355
Lele01g1503 448 Pfam mTERF 93 244 IPR003690 GO:0003690|GO:0006355
Lele01g1503 448 Pfam mTERF 271 350 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1503 Lele-ChrLele01 9419376 9423449 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele01g1503 mTERF 2.7e-20 No_clan