Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1501 ATGCTAATTTTTCTGATTGCAAGATTATCTTCTTCCCTGCGGACGGGAACCCAGTTAGGGTTTCTTCATCACTATGCATCCCACATTTCCTATTCGTTTTCTTCCGTTGCGAAATTATCTCAGTCAAATCGACCAGATGGAAATCATTCGTTTACGGTTTCTTACCTCATGAACTCATGTGGCATGTCCGCCAAAGTTGCTAGTGAGGTATCGAAAAGGGTTGAACTGAGAGACTCAGATAAACCCGATGCCGTACTCAATCTTCTCAGAAGCTATGAATTCTCAGATGCACAGATATCCAAAATTTTGACATGCTATCCTCGGGTGCTTTTGGCTAATCCTGAGCTCAATCTTTTGCCCAGGTTAAGGTTTATGCAGTCTATAGGGTTTTCAGCTTCTGAAATCCCAGAACTCATCTCCTATAACCCTGCATTAGTATTGTATAGCTTAGAGAAACGTATAATTCCCCACTATGAGGCCCTTAAAAGTGTACTTGGTGATGATCGGAAAGTAAGAAAATGTTTTAAAAGCTCGAGGTGGCATGTCCGCTCCTATGATGTGACGAATATAGTTCCCAACATAAAGTTTTTGAGAGATGAAGGAGTTCCTCAACCTTTTGTCTTTACTCTGTTATCTAGACGTGCAGATATAACATTTATGAATCACTCGATGTTTGTGGAACATGTCAAATTTGTCAAGAAAATAGGATTTGAACCTTTGAAGTTTGCGTTTGTTGAAGCACTTATAGTTGTAACACAGTTGAGTAAATCAACCTGGGAGTTGAAACTGGATATCTTTGAAAGATTAGGCTGGTCCAAGGATGTCACTCTTTTGGCATTCAGTAAGGTCCCAAATATCATGTTTATGTCAGAGAAAAATATCACAGACACAATGAAGTTTTTTATAGAAGAAATGGGTGTTCCGTTGGAAGATATAGCTGGGTGCCCGAATATTCTTAGATATAGCTTGAAGAAGAGAATTGTTCCTAGATGTTCAGTGGTGAAGATTTTGAAAATGAAGGGTTTAATCAAGGATACTTTGTCCCTACCTTTCCTCATTAATATGGCCGAGGAGAAGTTTCTGGAAGATTTTGTGATTAAATTTAAGGGCAGTGTTCCTCAGCTGCCGAAACTCTATTGTGGTGAATTGGGACCTTTACCTGAAGTTCTGGCGTAG 1176 0.3954 MLIFLIARLSSSLRTGTQLGFLHHYASHISYSFSSVAKLSQSNRPDGNHSFTVSYLMNSCGMSAKVASEVSKRVELRDSDKPDAVLNLLRSYEFSDAQISKILTCYPRVLLANPELNLLPRLRFMQSIGFSASEIPELISYNPALVLYSLEKRIIPHYEALKSVLGDDRKVRKCFKSSRWHVRSYDVTNIVPNIKFLRDEGVPQPFVFTLLSRRADITFMNHSMFVEHVKFVKKIGFEPLKFAFVEALIVVTQLSKSTWELKLDIFERLGWSKDVTLLAFSKVPNIMFMSEKNITDTMKFFIEEMGVPLEDIAGCPNILRYSLKKRIVPRCSVVKILKMKGLIKDTLSLPFLINMAEEKFLEDFVIKFKGSVPQLPKLYCGELGPLPEVLA 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1501 391 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Lele01g1501 391 SMART mt_12 136 168 IPR003690 GO:0003690|GO:0006355
Lele01g1501 391 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
Lele01g1501 391 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Lele01g1501 391 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Lele01g1501 391 FunFam Mitochondrial transcription termination factor-like 150 372 - -
Lele01g1501 391 PANTHER CGI-12 PROTEIN-RELATED 49 366 IPR003690 GO:0003690|GO:0006355
Lele01g1501 391 Pfam mTERF 86 294 IPR003690 GO:0003690|GO:0006355
Lele01g1501 391 Pfam mTERF 252 361 IPR003690 GO:0003690|GO:0006355
Lele01g1501 391 Gene3D Transcription termination factor 3, mitochondrial 47 179 IPR038538 -
Lele01g1501 391 Gene3D Transcription termination factor 3, mitochondrial 180 369 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1501 Lele-ChrLele01 9409726 9410901 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele01g1501 mTERF 4.9e-27 No_clan