Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1499 ATGGATAACGCAAACGAAGCATCATCTTACTTATCAAATGGGTCAAGTAATCCCAACATATCTGCCTGCACTAGCCATGAGCATGTGGCAAATCCTGAGAATCTGAGCCTCAGTAAGCTGAGCGGAAGCCTTGAGATGCTATTGATAGAAAATGGATATGACTATAGTGACGTTGAAATTGTTGTTGAGGACCAACATGTGGGTGTTCATAGATGTATATTGGCTTCACGTAGTCAGTTTTTTCATGAACTTTTTAAGAAAGGAAATGATGGCTCAGTGAAGAAAGGTAGTAAGCCGAGGTATCTCATGTCAGACCTGGTGCCTTATGGCGTCGTTGGACATGAAGCATTCCGTGTTTTCTTGCATTATTTATACACCGGAAAGATGAAGGCATCACCCCTAGATGTATCAACATGTGTTGATGAAACATGTGTGCATGATGCATGCCGGCCTGCTATTAATTACGCTTTAGAGCTGATGTATGCTTCTGCAACATTTCGGATGAAAGAACTTGTTTTACTTGTTCAGCGGCGTCTCCTCAATTTTGTTGAGAAGGCTCTTGTAGAAGACCTGATTCCTATTCTTATGGCTGCCTTCCACTGCCAACTAGACCAGCTTCAGTCACACTGCATCCAAAGATTAGCAAGATCTGACCTTGAGAACACAACTTTGGAAAGAGAGCTCCCACCTGAAGTTTTTAGTGAAATCAAATCACTCCGACGCAAAGCTCTGGCAGAATCTACTCCTGATGCAATGGAAGCGGAACCTTCAAATGAAAAAAGTATTAGGAAAATCCTTAAAGCATTGGACTCTGATGATATTGAGCTGATGACTCTTCTTTTGGAGGAATCTAGTGTCACTCTAGATGATGCTTATGCCCTACACTACGCCTGTGCCTATTGTGATTCTAAGATTGTTAAAGAAGTTCTTAATCTTGGGTTGGCTGACATAAACCATACAAATCCCCGAGGGTATTCAGTTCTCCATGTGGCCGCAAGGCGCAAAGATCCGACAATTTTAGTAGCACTGTTGACTAAAGGGGCCTGTGTATCAAATATCACACCGGATGGACAAACGGCTGTTGCAATTTGTCGGAGGATGACGAGACCCAAGGATTACAATGAGATAGCAGCGCAAGGGAAGGAATCTAACAAAGACAAGCTATGTGTTGATCTCCTGGAGAGAGAAATGAGAAGAACTTCAATGTCTGTGAATGCATCTGTTTCATCAGAGTTAACTGCTGATGATTTGCACATGAGACTTGATTACCTGGAAAATAGAGTTGCTTTTGCCAAGCTATTGTTTCCTGCTGAGGCTAAGGTGGCCATGGATAATGCTGAGGCAGAGTCTACACTGTATGCAAACCGATTGAGGGGCTCAAGTGGCAACCTAAGAGAAGTTGATCTAAATGAAACTCCTTCTGTGAGAACCAGAAAACTCCAGTTAAGATTGAAAGCCCTTTTGAAAACAGTTGAGAATGGCCGGCGCTTCTTTCCCCATTGCTCTGAGGTTCTTGATAAGTTTCTAGACGACGACATGCCCGATATCTTCTTCTTAGAGAAGGGTAGCGAACAAGAACAGAGCATGAAGAAGCAACGCTTCATGGAGCTAAAAGATGATGTTCAGAGGGCATTTCATAAGGATATGGCTGAAAACAACGGTTCAGGTTTTTCCTCCTCAGTTTCTTCCTCATCATCGTCATCTAAGAAAGGAGGTCTCAGCCAAAAAGTGAGGAAAAAGTGA 1743 0.4286 MDNANEASSYLSNGSSNPNISACTSHEHVANPENLSLSKLSGSLEMLLIENGYDYSDVEIVVEDQHVGVHRCILASRSQFFHELFKKGNDGSVKKGSKPRYLMSDLVPYGVVGHEAFRVFLHYLYTGKMKASPLDVSTCVDETCVHDACRPAINYALELMYASATFRMKELVLLVQRRLLNFVEKALVEDLIPILMAAFHCQLDQLQSHCIQRLARSDLENTTLERELPPEVFSEIKSLRRKALAESTPDAMEAEPSNEKSIRKILKALDSDDIELMTLLLEESSVTLDDAYALHYACAYCDSKIVKEVLNLGLADINHTNPRGYSVLHVAARRKDPTILVALLTKGACVSNITPDGQTAVAICRRMTRPKDYNEIAAQGKESNKDKLCVDLLEREMRRTSMSVNASVSSELTADDLHMRLDYLENRVAFAKLLFPAEAKVAMDNAEAESTLYANRLRGSSGNLREVDLNETPSVRTRKLQLRLKALLKTVENGRRFFPHCSEVLDKFLDDDMPDIFFLEKGSEQEQSMKKQRFMELKDDVQRAFHKDMAENNGSGFSSSVSSSSSSSKKGGLSQKVRKK 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1499 580 MobiDBLite consensus disorder prediction 545 580 - -
Lele01g1499 580 ProSiteProfiles BTB domain profile. 56 133 IPR000210 GO:0005515
Lele01g1499 580 MobiDBLite consensus disorder prediction 552 572 - -
Lele01g1499 580 Pfam Ankyrin repeats (3 copies) 272 349 IPR002110 GO:0005515
Lele01g1499 580 ProSiteProfiles Ankyrin repeat profile. 323 355 IPR002110 GO:0005515
Lele01g1499 580 SMART BTB_4 56 183 IPR000210 GO:0005515
Lele01g1499 580 Pfam Domain of unknown function (DUF3420) 218 266 IPR024228 -
Lele01g1499 580 Pfam NPR1/NIM1 like defence protein C terminal 365 564 IPR021094 -
Lele01g1499 580 Pfam BTB/POZ domain 52 132 IPR000210 GO:0005515
Lele01g1499 580 SUPERFAMILY Ankyrin repeat 265 367 IPR036770 -
Lele01g1499 580 CDD BTB_POZ_NPR_plant 45 170 - -
Lele01g1499 580 Gene3D - 257 397 IPR036770 -
Lele01g1499 580 SUPERFAMILY POZ domain 52 181 IPR011333 -
Lele01g1499 580 FunFam regulatory protein NPR3-like 257 397 - -
Lele01g1499 580 Gene3D Potassium Channel Kv1.1; Chain A 20 215 IPR011333 -
Lele01g1499 580 FunFam Regulatory protein NPR3 30 215 - -
Lele01g1499 580 PANTHER REGULATORY PROTEIN NPR3 10 571 IPR044292 GO:0009862|GO:2000022|GO:2000031
Lele01g1499 580 SMART ANK_2a 289 319 IPR002110 GO:0005515
Lele01g1499 580 SMART ANK_2a 323 352 IPR002110 GO:0005515
Lele01g1499 580 ProSiteProfiles Ankyrin repeat region circular profile. 323 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1499 Lele-ChrLele01 9399021 9402352 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele01g1499 NPR1_like_C 6.4e-83 No_clan