Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1494 ATGGAGGATGAAAGTAAGGTGATGAGTAACAGCATGATGAGGTCATCAGGAAAAGAAGAAGAAGAAGAAGAAGAAGACGATGAAGGAGGGAAGCTTCCAGGGTTCAGATTCCATCCAACAGATGAAGAATTGGTAGGGTTTTATCTGAGAAAGAAGGTGGAGAAGAAGACTCTTCGAATCGAACTCATCAAACACATTGATATCTACAAATACGATCCCTGGGATCTCCCAAAGGCGAGCGGGATCGTAGGGGAGAAGGAATGGTACTTCTTCTGCAAGAGGGGGAGGAAATACAGAAACAGCATCAGGCCAAATAGGGTCACTGGCTCTGGCTTCTGGAAGGCTACTGGAATTGACAAGTCCATTTACAATAATGCCCTCACCCAATGCATTGGCCTCAAGAAGTCCCTCGTCTATTACAGGGGCGCTGCTGGTAAAGGCACCAAGACTGATTGGATGATGCACGAGTTTCGCCTCCCCCCTAATAATAACCCTACCACCACCACCACCACCAATCATCTTCAAGAAGCTGAAGTGTGGACACTTTGCAGAATATTCAAACGAATCCCATCCTACAGAAAATACACACCAACTTCCAAAACTACAGCAATAGCGACAAATTCAAGCAATTCGAAAACATTAGAATTTGACAAATACAATGACAACAACAAGCCTTACAGCTCGACTTGTTCAAGATCATCGTTGTCGTCATCAAACTCTATTGTTACTCATCATCTTGAAAGAAAATTACCAGTTCTTAATGATGAAAGAAGCCACTTTTTTCTGGGTCAGTTTGCTGCTCATCATCAAGCTCCTTCATCAATGGTGACTAATAATATTAGTTATTATAACCACAGCCTCTTGAATCATCAGAATGTGGAAGATGTGCTTGCTAGTGGTAATTGGGATGAACTCAGATCTGTCATTCAGTTTGCTGCTGATCATTCCACTGTTTCATGA 960 0.426 MEDESKVMSNSMMRSSGKEEEEEEEDDEGGKLPGFRFHPTDEELVGFYLRKKVEKKTLRIELIKHIDIYKYDPWDLPKASGIVGEKEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKSIYNNALTQCIGLKKSLVYYRGAAGKGTKTDWMMHEFRLPPNNNPTTTTTTNHLQEAEVWTLCRIFKRIPSYRKYTPTSKTTAIATNSSNSKTLEFDKYNDNNKPYSSTCSRSSLSSSNSIVTHHLERKLPVLNDERSHFFLGQFAAHHQAPSSMVTNNISYYNHSLLNHQNVEDVLASGNWDELRSVIQFAADHSTVS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1494 319 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 30 264 - -
Lele01g1494 319 FunFam NAC domain-containing protein 35 40 191 - -
Lele01g1494 319 Pfam No apical meristem (NAM) protein 33 159 IPR003441 GO:0003677|GO:0006355
Lele01g1494 319 ProSiteProfiles NAC domain profile. 31 188 IPR003441 GO:0003677|GO:0006355
Lele01g1494 319 MobiDBLite consensus disorder prediction 1 34 - -
Lele01g1494 319 SUPERFAMILY NAC domain 31 187 IPR036093 GO:0003677|GO:0006355
Lele01g1494 319 Gene3D NAC domain 40 191 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1494 Lele-ChrLele01 9371433 9375437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1494 12 249 NAC Transcription Factor Family AT5G39820 48.617 9.93e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele01g1494 NAM 2.2e-35 No_clan