Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1483 ATGGCGAATGAGAAGGATCATTACTACGATCAGTATGATCTCAATACTTTCTATTACAACCATCACCAGAACCTTGTTCAAGGGTTCGATCACCATCATCATCCTTCTATTTCACAGGGAACGGCGAGCTTCACAGATTGCTTGAATGGTGGGTTCATGGACTATAATGTTCTCTCAAGAGCCTTTGACTTGTCTTGTTCATCAGCATCTGAAGTGATCTCCTCCTCCATTAACGGCGGCGGCAGCGGCGATGAGCTCATCAATCCAAAGAATAAGCCTCCACCATCATCATCAGCTGGCGCAGCCGCCACTAGTCCTACGACCACTGTCACAGATTCTCAAGTGATGGGCCTCAATAATTCCTCTGTGTCGAATTCATCTTCCAATAATGAAGCAGAAGAAGCAGTGATAACAGAAGAAGACTCGGCCAAAAGCTTCAAGAAAGAGAAGAAGGACCAAGATGCAGAAGAAATGTCCAAGAAAGAGAACAAGACAAAAGGGAATAATAAGAAAGAGAAAAAGGCAAGAGAACCGCGTTTTTCGTTCTTGACTAAAAGTGAGGTGGATCACTTAGAAGATGGATACAGATGGAGGAAATATGGACAGAAAGCCGTCAAGAACAGTCCTTACCCAAGGAGTTATTATAGATGCACAAGTCAAAAGTGCAATGTGAAGAAGAGAGTGGAGAGGTCATTTCAGGATCCATCAATTGTGGTGACGACATATGAAGGGCAGCACGACCACCATTGTCCGGCGACACTCCGGGGAAGCGCCAACGCCGCCATGATGTTATCATCCGCGGCGATGGCGGGAACGCCTAATTCCCTTTTCGGTTCTTCGCCGATGGGGAGGACGACAGCCATGTTACCCCAGGAACTTCTTGCTCAGTTTCTTCCAAGTTATCAAGGTGATGATCATCTTCATCATCATCACCAACAAAACCATCCCATGTTCCACCAAAACCCTAATAATAATAATACTAATCATCGTCACCAGCAAGTCCCTCACGACCATGGCTTGTTGCATGACCTGTTACCTCCTTCTTCTTCATCCTTCCCTAGTAGACAACAACGACAAGAGCCATGA 1086 0.4576 MANEKDHYYDQYDLNTFYYNHHQNLVQGFDHHHHPSISQGTASFTDCLNGGFMDYNVLSRAFDLSCSSASEVISSSINGGGSGDELINPKNKPPPSSSAGAAATSPTTTVTDSQVMGLNNSSVSNSSSNNEAEEAVITEEDSAKSFKKEKKDQDAEEMSKKENKTKGNNKKEKKAREPRFSFLTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCNVKKRVERSFQDPSIVVTTYEGQHDHHCPATLRGSANAAMMLSSAAMAGTPNSLFGSSPMGRTTAMLPQELLAQFLPSYQGDDHLHHHHQQNHPMFHQNPNNNNTNHRHQQVPHDHGLLHDLLPPSSSSFPSRQQRQEP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1483 361 MobiDBLite consensus disorder prediction 137 178 - -
Lele01g1483 361 MobiDBLite consensus disorder prediction 91 133 - -
Lele01g1483 361 SUPERFAMILY WRKY DNA-binding domain 184 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele01g1483 361 MobiDBLite consensus disorder prediction 347 361 - -
Lele01g1483 361 ProSiteProfiles WRKY domain profile. 186 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g1483 361 Gene3D WRKY domain 177 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele01g1483 361 MobiDBLite consensus disorder prediction 303 361 - -
Lele01g1483 361 Pfam WRKY DNA -binding domain 192 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g1483 361 Coils Coil 129 149 - -
Lele01g1483 361 MobiDBLite consensus disorder prediction 316 330 - -
Lele01g1483 361 SMART WRKY_cls 191 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele01g1483 361 MobiDBLite consensus disorder prediction 77 178 - -
Lele01g1483 361 FunFam WRKY transcription factor 57 177 251 - -
Lele01g1483 361 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 81 321 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1483 Lele-ChrLele01 9294637 9296543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1483 41 287 WRKY Transcription Factor Family AT4G18170 50.800 1.57e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele01g1483 WRKY 3.5e-25 CL0274