Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1482 ATGCCGTCCAATAGTTCTCTGAACGTGCAGCTGTCTAAGAAGACAACGTTTTTGGGTTTGAAACTATGGGTCTTAATTGGGATAGGGGTGGGTGCATTTATAGTCCTGATTCTTTGTATATTGTCTATATGGGTGATGTTTTGGAGAAAGTCAAAGAGACCACCGAACAAATACACTGCATCACAGATACCGAATGTGTCAAAAGATATTAAGGTCGATAAGGTTGGAGTGCAGAGTTCTTATAGTCACCAAGAAAGTGTATATGTTCAACCCTTTCATGAGAAGGCAAGTGATAAGAATCCAGATAAGGTGTTAGTTCAGTCAGGCATGAGCAAATCCAGTGATCCGGACAATATCAGTCAGGGAAGTTCGATAAATCATCATGAGAGAGGAGGTAGTTCGATGTCGGGTGAGGATGGAGGATCTGGGGCCTTTAAGAAGCAATCTGCATTATCATATGGTGGAATGGTGACTGCCTCTCCTTTAATTGGTTTGCCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACTCTCAGGGATCTTGAACTTGCAACAAATCGATTCTCAGCGGAGAATGTGATTGGTGAGGGTGGATATGGGGTTGTTTACCGGGGAATATTGATCAATGGAACCGAGGTGGCGGTGAAGAAAATTCTTAATAACTTGGGACAAGCAGAGAAGGAGTTCAGGGTTGAAGTGGAGGCTATAGGCCATGTTCGACATAAGAATCTTGTTCGCCTGCTTGGGTATTGCATCGAAGGAGTTCACAGGATGCTTGTGTATGAGTACGTGAATAATGGTAACTTAGAGCAATGGTTACATGGGGGCATGCGCCAACACGGCACACTTACCTGGGAGGCCCGCATGAAAGTTATAACCAGCACAGCCAAAGCGCTTTCATACTTGCATGAAGCAATAGAACCGAAAGTTGTTCATCGTGACATTAAGTCTAGCAACATATTAATTGATGATGATTTCAATGCAAAGGTTTCTGACTTCGGTTTGGCCAAACTCTTGGGTTCAGGAGAAAGTTACATAACAACTCGAGTCATGGGAACATTCGGTTATGTGGCACCAGAGTATGCTAATACTGGTTTGTTAAATGAGAAGAGCGATGTTTACAGCTTCGGTGTTCTACTTCTCGAAGTGGTTACTGGAAGGGACCCTGTTGACTATGCACGTCCTGCTAATGAGGTTAATCTTGTTGAATGGCTCAAGCTTATGGTCAGTGCTAGAAGAGCCGAGGAAGTCATAGACCCGAGCCTCAAAGTTAAACCATCAACGCGGGAATTAAAACGTGCCCTTCTGGTAGCACTTAGGTGTCTTGATCCTGCTGCAGAAAAGAGGCCCAAAATGAGTCAGGTTGTGAGGATGTTTGAAGCCGACGAAAATCCATTTCGCGAGGATCGAAGGAACCGGAAGAGCCGCCCTGGCAGCATGGAAATTGAAACCACAAAGGATCTTTCCGGTGGACCCAATGCTGAGAAGTCTGGGGATTCTGAAAGCCACAAGCCAGAGGCGATTCAAAGAGGCCAATTCATTATTTACATCATTGTTGATATTTTGGCCCTTTCGGTTTCGGCTGAGTCTGGATCTTTTGGAGTTCTTTTTGTTATACAGTTCTTGCGAGGTTCAGAAAGAGAAAAGAGAAGAGAAAATGAACTCTGA 1671 0.4434 MPSNSSLNVQLSKKTTFLGLKLWVLIGIGVGAFIVLILCILSIWVMFWRKSKRPPNKYTASQIPNVSKDIKVDKVGVQSSYSHQESVYVQPFHEKASDKNPDKVLVQSGMSKSSDPDNISQGSSINHHERGGSSMSGEDGGSGAFKKQSALSYGGMVTASPLIGLPEFSHLGWGHWFTLRDLELATNRFSAENVIGEGGYGVVYRGILINGTEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGGMRQHGTLTWEARMKVITSTAKALSYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGSGESYITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEVVTGRDPVDYARPANEVNLVEWLKLMVSARRAEEVIDPSLKVKPSTRELKRALLVALRCLDPAAEKRPKMSQVVRMFEADENPFREDRRNRKSRPGSMEIETTKDLSGGPNAEKSGDSESHKPEAIQRGQFIIYIIVDILALSVSAESGSFGVLFVIQFLRGSEREKRRENEL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1482 556 MobiDBLite consensus disorder prediction 467 482 - -
Lele01g1482 556 MobiDBLite consensus disorder prediction 105 143 - -
Lele01g1482 556 CDD STKc_IRAK 195 461 - -
Lele01g1482 556 FunFam Putative receptor-like serine/threonine-protein kinase 265 475 - -
Lele01g1482 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Lele01g1482 556 MobiDBLite consensus disorder prediction 105 131 - -
Lele01g1482 556 SMART serkin_6 189 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1482 556 Gene3D Transferase(Phosphotransferase) domain 1 265 476 - -
Lele01g1482 556 MobiDBLite consensus disorder prediction 467 505 - -
Lele01g1482 556 ProSitePatterns Protein kinases ATP-binding region signature. 195 218 IPR017441 GO:0005524
Lele01g1482 556 FunFam Putative receptor-like protein kinase 171 264 - -
Lele01g1482 556 ProSiteProfiles Protein kinase domain profile. 189 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1482 556 SUPERFAMILY Protein kinase-like (PK-like) 173 463 IPR011009 -
Lele01g1482 556 PANTHER OS01G0323000 PROTEIN 1 482 - -
Lele01g1482 556 Pfam Protein kinase domain 191 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1482 556 Coils Coil 209 229 - -
Lele01g1482 556 Gene3D Phosphorylase Kinase; domain 1 171 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1482 Lele-ChrLele01 9280342 9283715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1482 19 463 Trihelix Transcription Factor Family AT1G70460 37.916 1.00e-89 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele01g1482 Pkinase 2.9e-49 CL0016