Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1479 ATGGATGAACCACTTCTCTCCAAGAAACGAGGAGTGGTCGCAGAATCAGCAAGCAGGCCAGCATCCCTAAGAGAGCTTAACTCATCTTATATTGATCTTATCACCAATGAAAAAATCATTCAGATCATTACCACACTCAAGAATAGCCCTTCTTATTTGAACCTTATAGCCAACTTGAACAGAAGAAAGAAGATCATCCTTCGCTCGCACTCTGCTCCATCAGTTTTCACTGATGTCAGAGGAAATGGTCACGATTCCTTTGACCTCAGAATTTCACAGAAAACATCACCTGCAATAGTAAGGTTATCCTTTATTGGTTTCATCTTGTATGTAGCAACCGGGGTTTTAGTTTACTTGGTAAGTGGGAGTTTCAAGGGCAAATCCACGTACAAGCCTGTGGATGCTGTGTACTTCACAGTAGTAACTCTCTGCACAATAGGATATGGTGATATTGTCCCAGACACAGCACTCACCAAAATCTCTACCTGTGGGTTCATTCTGGTGGGTTTCGGATTCGTCGGCATTCTGCTGAATGGCTTAGTCACCTACGTTTGAACAATTTGTGCTCGCTTCCCTGAGAACTTGGATTGGCTGGACAGTTTTTATCTCTCTGTTACAACAGTGGGCTATGGCGATTATGCTTTTACTACTAAGTGGGGAAGGGTTTTTGCATCATTATGGCTCTTGGCGAGCACATTGGCTGTCGGCAGGGCCTTTCTGTACCTAACTGAATACAGTATTGACAAGAGGAATCGTACCATTGCAAAATGGATTCTTCACAAGAAGATTACCTTGTCATATTTAGTGGCCGCTGACCTTGACAACGATGGATCAATCAGCAAGTCTGAAATTGTCATATATAAGCTTAAGGAGATGGGGAAGATAGCTGAGAATGACATTCTACAAATAGGCAAACAATTTGACTCATTGGACAGTAGCCAATGTGGCAAGATTACTCTTGCTGACCTAATGGAAACTGCCTAA 984 0.4258 MDEPLLSKKRGVVAESASRPASLRELNSSYIDLITNEKIIQIITTLKNSPSYLNLIANLNRRKKIILRSHSAPSVFTDVRGNGHDSFDLRISQKTSPAIVRLSFIGFILYVATGVLVYLVSGSFKGKSTYKPVDAVYFTVVTLCTIGYGDIVPDTALTKISTCGFILVGFGFVGILLNGLVTYVXTICARFPENLDWLDSFYLSVTTVGYGDYAFTTKWGRVFASLWLLASTLAVGRAFLYLTEYSIDKRNRTIAKWILHKKITLSYLVAADLDNDGSISKSEIVIYKLKEMGKIAENDILQIGKQFDSLDSSQCGKITLADLMETA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1479 327 Gene3D - 187 262 - -
Lele01g1479 327 Gene3D - 87 186 - -
Lele01g1479 327 SUPERFAMILY Voltage-gated potassium channels 194 262 - -
Lele01g1479 327 PRINTS Two pore domain K+ channel signature 206 215 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele01g1479 327 PRINTS Two pore domain K+ channel signature 141 169 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele01g1479 327 SUPERFAMILY EF-hand 268 325 IPR011992 -
Lele01g1479 327 Pfam Ion channel 107 184 IPR013099 -
Lele01g1479 327 Pfam Ion channel 188 243 IPR013099 -
Lele01g1479 327 ProSitePatterns EF-hand calcium-binding domain. 272 284 IPR018247 -
Lele01g1479 327 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 189 301 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele01g1479 327 SUPERFAMILY Voltage-gated potassium channels 97 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1479 Lele-ChrLele01 9266220 9267665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1479 68 325 Ion Channels AT4G18160 43.312 1.22e-74 234