Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1470 ATGCAGCAAGATCACAGAAAAAAGAGTTCAACAGAGATTGACTTTTTCTCTGAATATGGTGATGCCAACCTTTATAAAATTCAAGAAGTCATTGGAAAAGGAAGTTATGGTGTTGTTTGTTCAGCGATTGACACACACACCGGTGAGAAAGTGGCAATAAAGAAGATACATGACATTTTTGAGCACATCTCTGATGCTGCCCGTATTCTCCGTGAGATAAAGCTGCTCAGACTTCTACGACATCCTGACATTGTTGAAATTAAACACATTATGCTTCCTCCTTCTAGCAAGGACTTTAAAGATATTTATGTTGTTTTTGAGCTAATGGAATCTGATCTTCACCAAGTCATCAAAGCTAATGATGACTTAACGAAAGAGCACTATCAGTTTTTTCTTTACCAGCTACTTAGAGCATTGAAGTATATTCACACTGCAAATGTCTATCATCGAGATCTGAAACCAAAGAATATATTGGCCAATGCAAATTGTAAACTCAAAATCTGTGATTTTGGGTTAGCTAGGGTTGCTTTCAGTGACACCCCAACTACTATATTTTGGACGGATTATGTTGCTACAAGATGGTATAGAGCTCCGGAGCTTTGTGGATCATTTTACTCAAAGTATACACCGGCGATTGATATCTGGAGTATAGGTTGTATCTTTGCAGAAGTACTAACAGGAAAACCACTTTTTCCTGGTAAAAATGTTGTTCATCAGTTGGATCTGATGACTGATCTGCTTGGGACTCCCTCACTGGATACTATATCCCGGGTTCGGAATGATAAGGCGAGGAGATATCTAACTAGCATGAGGAAAAAGCAACCTGTGCCATTTGCACAAAAATTTCCTAATGCAGATCCCTTAGCTCTACGATTATTGGAAAGATTGCTTGCTTTTGATCCGAAAGACCGGCCTACTGCTGAAGAGGCATTGGCTGATCCTTACTTTAAGGGATTGGCAAAGGTTGAGAGGGAACCGTCCTGCCAGCCCATCAGTAAACTGGAGTTTGAGTTCGAAAGGCGAAGAGTCACAAAGGAGGAAATACGAGAGCTAATTTTCCATGAGATTTTAGAGTATCATCCACAACTATTGAAGGACTACATAAATGGAACAGAGAGACCAAATTTTCTTTATCCGAGTGCTGTTGATCACTTCAGGAAGCAGTTTGTTCACCTTGAGGAAAATAATGGTAAAAATGGCCCCATCATGCCTCTAGAAAGAAAGCATGTTTCTCTTCCAAGGTCGACCGTTGTGCATTCAAATATGGTTGCACCAAAAGAGCAATCAGATATCAATTCCAGCAAAAACAGGCAAATATCTGAGGAATATGATAAGAACTCCAAAGACACAGAAATTTCTGTTTCAAGGTCAATGCAGGGGCAGCTAAGAGTCCCAATAGCCAAACCTGGAAAAGTAGTTGGGCCAGTTGTTCCTTATGAGTATACGAGCGTCATCAAAGACTCTTATGATCCAAGGACATTTATCAGAGGTTCTATGCTTCCTTCTCAAGCTGTCCATCCAGCTTATTATTACCAAAGATCGGGCTCTGGAAATCTAGAAAGGTCAGCTACAACAGAATCTGATAAGGGTGTATCTATGCAAGCCAAACACGCGCATTCTGAAGTTCGTGCCAAAATAGCGCCAGATATAGCTATTAATATTGATACAAACCCTTTTTTTATGACACGGGCAGGAGTGAACGGCATGGAACAGGATGATCGAATAGCTATGGACATGACGAATCTAATGCCGACGAAGGCTCAATATGGTCAGATTGGTGCCACCACGACGGGGACTACCGCTCACAGAAAGGTTGGTCCAGTTCAGTATGGCATGACTGGTATGTTTTAG 1851 0.4106 MQQDHRKKSSTEIDFFSEYGDANLYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSSKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKLEFEFERRRVTKEEIRELIFHEILEYHPQLLKDYINGTERPNFLYPSAVDHFRKQFVHLEENNGKNGPIMPLERKHVSLPRSTVVHSNMVAPKEQSDINSSKNRQISEEYDKNSKDTEISVSRSMQGQLRVPIAKPGKVVGPVVPYEYTSVIKDSYDPRTFIRGSMLPSQAVHPAYYYQRSGSGNLERSATTESDKGVSMQAKHAHSEVRAKIAPDIAINIDTNPFFMTRAGVNGMEQDDRIAMDMTNLMPTKAQYGQIGATTTGTTAHRKVGPVQYGMTGMF 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1470 616 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Lele01g1470 616 FunFam Mitogen-activated protein kinase 111 339 - -
Lele01g1470 616 FunFam Mitogen-activated protein kinase 17 118 - -
Lele01g1470 616 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Lele01g1470 616 MobiDBLite consensus disorder prediction 424 451 - -
Lele01g1470 616 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1470 616 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 26 370 - -
Lele01g1470 616 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1470 616 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1470 616 MobiDBLite consensus disorder prediction 437 451 - -
Lele01g1470 616 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Lele01g1470 616 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lele01g1470 616 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Lele01g1470 616 CDD STKc_TDY_MAPK 25 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1470 Lele-ChrLele01 9175385 9180352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1470 1 436 MAP Kinase Gene Family AT2G42880 87.156 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele01g1470 Pkinase 6.4e-68 CL0016