Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1455 ATGACTGGGACTTTGAAAATGAGAATCCTTGCAGTGGGAAAGGGCAGTGGAATGCTTCTGATAAGGTCAAACACTTTGAGAGCATTGTGGACTGTAAATGTAACAAGTCTTCTTGCCATATTATCCTTGAAGGCTCAGAATCTTTCGGGTACTATCCCACCAGAATTTTCCAAGCTAAATCATCTCAAGAAATTGACCCTGAGTCTTAACGTTCTCAATGGTCCTATACCTGATCAATGGGCTAGCATGCAATTGGTTGACCTCTCGATTATGGGAAACAGATTGTCAGGTCCATTCCCCACAGTTCTCACGAACATCATGACTCTCCAGAATCTGACTATTGAAGGAAATCAATTTTCAGGTCCCATTCCACCAAATATTGGAAAGTTGATCAAGTTAGAAAAACTCCATCTGACGTCAAATGCATTCACTGGAGAATTGCCAGCTGAACTTTCCAAGTTAAAGAATTTGACTGATTTGAGGATAAGTGACAATAACATCTCTGGGCGGATTCCTGATTTAATTGGTAAATGGACATTAATTAAAACGCTGCACATGGAGGGTTGCTCTCTTGAGGGGCCCATACCTCAAAGCATTTCAGCCTTGACAAGATTAAGTGATTTGAGGATAACTGACCTAAAAGGTGGAGCCTCTGATTTTCCATCATTAAGTAAGATGAAATCCATGGAAAAATTGATATTGAGGAACTGTATGATTAAAGGGGAGATCCCAGAAGATATTGGAAGAATGGAAAACCTGACAACCTTAAGTAGAGTTAAACCATGCCCGAAAAGGAACTTCCCTTGTCCTGCTTCGACCAAGCAATATTTGCATACTGTTGTTTCTTCAACAGATCATCATTCATTGCATGTTAATTGTGGTGGTAACGAAGCAAATATCAATGATGTAATATATGAATCTGACGTAGAAAATAGAGGTGCTGCAGCGTTTTACTCCACCCAGAACTGGGCACTTAGCAGCACAGGGGACTTCATGGACAATCATGAGAACTCTGATAACTATATTCTGACTAATACTTCTACACTTCTCAATGTCTCTGTCATAGATTCACAACTGTACACAGCAGCTCGCACATCTCCTCTTTCTCTCACATATTATGGACTCTGTCTCTTAAATGGAAACTACACTGTGAAGCTTCACTTCGCGGAGATTTTGTTCTTGAATGATAGATCATATTACAGTCTTGGAAGGAGGATATTTGATGTCTACATCCAGGGGAATTTGGTCCTGAAAGACTTCAATATAGAAAGTGAAGCTGGTGGTGCTGGTAAGCCTGTTGTCAGGACATTCAATGCTACAGTCACCCAACATACCTTGAAAATTCACTTTTACTGGGCTGGAAAGGGCACAACAAGCATACCAAAAAGAGGATATTATGGACCTCTAGTGTCTGCCATATCTGTGGATCCTATTCTTGTTCTTCTGGTCTTGGGCATCATGAGGAGGAAGGGCTGGCTAGGAAGCAATGATTCTATGTATAAAGATCTTAGAGGTTTGGATCTGCAGATGGGATTATTTACATTAAGACAAATCAAGGCAGCAACTGGAAACTTCAATGCAGCCAACAAAATTGGGGAAGGTGGATTTGGCTCTGTTTACAAGGGTCTACTGCCAGATGACACAGTAATTGCAGTGAAGAAGCTCTCCTCAAAATCTACGCAAGGCATCCGTGAATTTGTGAATGAGTTAGGAATGATATCTGGGCTTCAACATCCCAATCTTGTTAAGCTTTATGGATACTTTGGTTTTGCAAAACTCAATGCAGATGAAAATACCCATGTTAGCACTCGCATTGCAGGAACTATTGGTTATATGGCTCCTGAGTATGCGATGCGTGGTCATTTAACTGATAAAGCTGATATTTATAGCTTTGGTGTGGTTGCATTGGAAATTGTCAGTGGAAAGAGTAATACAAATTTCAGACCCAATGAGCAATTCATTTTCCTCCTTGATTGGGTAATTAAAGCTAATTTGAACTTTTTTTCTTACAAGTTCCTTATCTGCATTTTGTTCTATGCCAATGTTTTGCAAGAGAAAGGAAGGCTAATAGAGCTGGTGGATCCAGATTTGGGTTCAGAATGCTCAAGTGATGAGGCCATGTTAATACTAAACGTGGCACTCTTGTGTACCAATGCATCTCCTACACTTAGGCCAACAATGTCTCAAGTTTTGAGCATACTTGAACGTAGAAGTAACATGCAGGATCATCTTTCTGATCCAGGACAACAGCAAACAGCTAATAATCTCAAATATGAGGCCTTAAGAAGTCACTTCTGTGAGAATCTAAGCCTCCGAGAAAGCATGTCAATTCATGGTCAATGTCCTGGTTCCTCTAGTTCAGGCGTTGAAGTAGAAGGGAAGCACCTTCTGGTAAATGTTAGCTCAGACTCAACTAAAGCCGACAAGTTTGATACCAGAGAATCACAGCACAACCACAACCACACCTTTCTTTTTTCTTGGCTTGGCATTTTGCTGCATCTCTCAGAAATGACAAGCATTGCAACCCACCAAATCTCTCAGCCCATCACTTGTCATGCTTGGAGCCCTGATCAATCCATGATTGCCTTTTGTCCAAACAATAATGAAGTGCACATTTATGGATTGTTGGAAGACAAATGGGAAAAAGCGCATGTTCTTCAAAAGCATGACCAAGTAGTTTGTGGGTTGGACTGGAGTAATAAATCAAACAAGATAGTTACTGCATCCCATGATCGCAGTTCATATGTATGGAACTTTGAAGGATCGGAATGGGTGCCAACTCTTGTTGTGCTTAGGCTAAACCGCGCTGCTCTTTGTGTTCAGTGGAGTCCAAAAGAAAATAAGTTTGCAGTTGGAAGTGGGGCCAAAACTGTTTGTATATGCTACTATGAACAGGAGAACAACTGGTGGATGAGTAAACTCATCAGGAAAAGTCATGATTCTTCAGTGACAAATGTTTCATGGCACCCAAATAATATTCTTCTTGCAACAACATCTACAGATGGGAAATGCCGAGTGTTCTATACCTTTATAAAAGGTTGCTTCATAAATTGCTACAGGGATTCAACAACTCCAGAAACTAAATTTGGAGAGTTAATTGTTCAGCTTGATCTCTCCGTGTCCTGGACGTTTGGTGTCAAGTGGTCACCAAAGGGCACAACTTTAGCTTACGTAGGTCATAATTCGATTCTATATTTTGTTACTGACATTGGTCGTTCTCGTTCACCTGATACCCAAACTGTTCCTTATCGTGATTTGCCTCTCTGTGATGTTTGTTTTATTTCTGAGAATATGGTAATTGGTGTGGGATTTGACTGCGTCCCATTGGTTTTTGCCAAAGATGAAAGAGAAAAATGGAAATTCATCAGAAGTATTGGGGAAATGAGAGCAAGATCAGCTAGCTTAAAAGGATCACAGTATACCGATATATTTGGAAGATATATTGCTCGATCCAGGGATGAAGGGACAGTTGAAGCAGAAAGCGGGGGCTCTCATGACAAGTGTATAAATTGTGTGTTGCCTGTCAGGGGACGTGGGACATTGATAAAGCGTTTCAGCACGTCAGGTTTGGATGGAAGAGTCATCATATGGGATTTGGAGAAGCAGCAAGACCTTGCTGTATACATTTTAGGTCCTCTTTAA 3642 0.4077 MTGTLKMRILAVGKGSGMLLIRSNTLRALWTVNVTSLLAILSLKAQNLSGTIPPEFSKLNHLKKLTLSLNVLNGPIPDQWASMQLVDLSIMGNRLSGPFPTVLTNIMTLQNLTIEGNQFSGPIPPNIGKLIKLEKLHLTSNAFTGELPAELSKLKNLTDLRISDNNISGRIPDLIGKWTLIKTLHMEGCSLEGPIPQSISALTRLSDLRITDLKGGASDFPSLSKMKSMEKLILRNCMIKGEIPEDIGRMENLTTLSRVKPCPKRNFPCPASTKQYLHTVVSSTDHHSLHVNCGGNEANINDVIYESDVENRGAAAFYSTQNWALSSTGDFMDNHENSDNYILTNTSTLLNVSVIDSQLYTAARTSPLSLTYYGLCLLNGNYTVKLHFAEILFLNDRSYYSLGRRIFDVYIQGNLVLKDFNIESEAGGAGKPVVRTFNATVTQHTLKIHFYWAGKGTTSIPKRGYYGPLVSAISVDPILVLLVLGIMRRKGWLGSNDSMYKDLRGLDLQMGLFTLRQIKAATGNFNAANKIGEGGFGSVYKGLLPDDTVIAVKKLSSKSTQGIREFVNELGMISGLQHPNLVKLYGYFGFAKLNADENTHVSTRIAGTIGYMAPEYAMRGHLTDKADIYSFGVVALEIVSGKSNTNFRPNEQFIFLLDWVIKANLNFFSYKFLICILFYANVLQEKGRLIELVDPDLGSECSSDEAMLILNVALLCTNASPTLRPTMSQVLSILERRSNMQDHLSDPGQQQTANNLKYEALRSHFCENLSLRESMSIHGQCPGSSSSGVEVEGKHLLVNVSSDSTKADKFDTRESQHNHNHTFLFSWLGILLHLSEMTSIATHQISQPITCHAWSPDQSMIAFCPNNNEVHIYGLLEDKWEKAHVLQKHDQVVCGLDWSNKSNKIVTASHDRSSYVWNFEGSEWVPTLVVLRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWMSKLIRKSHDSSVTNVSWHPNNILLATTSTDGKCRVFYTFIKGCFINCYRDSTTPETKFGELIVQLDLSVSWTFGVKWSPKGTTLAYVGHNSILYFVTDIGRSRSPDTQTVPYRDLPLCDVCFISENMVIGVGFDCVPLVFAKDEREKWKFIRSIGEMRARSASLKGSQYTDIFGRYIARSRDEGTVEAESGGSHDKCINCVLPVRGRGTLIKRFSTSGLDGRVIIWDLEKQQDLAVYILGPL 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1455 1213 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 79 171 - -
Lele01g1455 1213 ProSitePatterns Protein kinases ATP-binding region signature. 531 554 IPR017441 GO:0005524
Lele01g1455 1213 ProSiteProfiles Trp-Asp (WD) repeats profile. 886 927 IPR001680 GO:0005515
Lele01g1455 1213 Gene3D Ribonuclease Inhibitor 19 266 IPR032675 -
Lele01g1455 1213 Gene3D - 284 476 - -
Lele01g1455 1213 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 286 478 - -
Lele01g1455 1213 SUPERFAMILY Protein kinase-like (PK-like) 511 737 IPR011009 -
Lele01g1455 1213 Gene3D - 837 1199 IPR015943 GO:0005515
Lele01g1455 1213 SMART WD40_4 968 1008 IPR001680 GO:0005515
Lele01g1455 1213 SMART WD40_4 927 962 IPR001680 GO:0005515
Lele01g1455 1213 SMART WD40_4 1154 1198 IPR001680 GO:0005515
Lele01g1455 1213 SMART WD40_4 879 918 IPR001680 GO:0005515
Lele01g1455 1213 SMART WD40_4 836 874 IPR001680 GO:0005515
Lele01g1455 1213 SMART WD40_4 1029 1068 IPR001680 GO:0005515
Lele01g1455 1213 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 886 920 - -
Lele01g1455 1213 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 34 587 - -
Lele01g1455 1213 Pfam Malectin domain 288 473 IPR021720 -
Lele01g1455 1213 Pfam WD domain, G-beta repeat 882 918 IPR001680 GO:0005515
Lele01g1455 1213 Pfam WD domain, G-beta repeat 977 1007 IPR001680 GO:0005515
Lele01g1455 1213 SUPERFAMILY L domain-like 26 256 - -
Lele01g1455 1213 Pfam Protein kinase domain 527 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1455 1213 ProSitePatterns Trp-Asp (WD) repeats signature. 905 919 IPR019775 -
Lele01g1455 1213 ProSiteProfiles Protein kinase domain profile. 317 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1455 1213 Gene3D Transferase(Phosphotransferase) domain 1 590 747 - -
Lele01g1455 1213 ProSiteProfiles Trp-Asp (WD) repeats profile. 976 1007 IPR001680 GO:0005515
Lele01g1455 1213 SUPERFAMILY WD40 repeat-like 842 1205 IPR036322 GO:0005515
Lele01g1455 1213 Gene3D Phosphorylase Kinase; domain 1 495 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1455 Lele-ChrLele01 8995992 9012839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1455 588 744 Receptor kinase-like Gene Family AT1G53430 64.968 1.75e-54 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele01g1455 Malectin 2.4e-43 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1455 01 8995992 9012839 Lele01g1455 01 8995992 9012839 ECH
Lele01g1455 01 8995992 9012839 Lele03g1460 03 8911916 8923544 hybridization
Lele01g1455 01 8995992 9012839 Lele04g1736 04 21892760 21900069 hybridization