Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele01g1427 | ATGAAGATAGAAGAAGCAATATTCGTAATGAGGTTTAAGGAGATTATTTCTGTGTGTGTTGCAATGTCCATGACAATTCTGGAACGAGTCGTTTTTGCTGCATTCATCTGCATTCTCGCTCTAGGAGGGTCAATAATGGGGACAACAGTGGGAGGGATGAAGGGACAGAGATCAGAAGCAGGGATACTTGATGGAGCTGGGAAAGGAGCAGTGTCAGGAGCCATTGCTGCTCTTGAATTGCTTGATCATTTTGTTGCTGATAATCATCATGAACCTATATCAAAGGTTGCCCTATTAAGCAGTTTATTCAATGGGAAGGTCCTAATGGAATGGGTATATTCAGCCTATCAATGGCATATTGGGATACCTGAAACAATCTACAGAGAAGTATCAGATATTTATGATATGAGAGGAGCGCCAGGGTTGTCCCACAAATTGATTCAAACCCTCCCTTTGCATCAATTCAACTCCACACAAATGTTGGCTTCATACAATGAATCCTGCTGCTCCATTTGCTTCCAGGAGTTTGAGGATGGAGATGTGATAAGGAGGCTTCCAAAATGTGACCATATTTATCACTTCCACTGTATAGATAAATGGCTCATCCAACAAGGATCATGCCCTATGTGTAGAACTTATGTTCTTGACAGTGATTTTGATGTCTAG | 666 | 0.4144 | MKIEEAIFVMRFKEIISVCVAMSMTILERVVFAAFICILALGGSIMGTTVGGMKGQRSEAGILDGAGKGAVSGAIAALELLDHFVADNHHEPISKVALLSSLFNGKVLMEWVYSAYQWHIGIPETIYREVSDIYDMRGAPGLSHKLIQTLPLHQFNSTQMLASYNESCCSICFQEFEDGDVIRRLPKCDHIYHFHCIDKWLIQQGSCPMCRTYVLDSDFDV | 221 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele01g1427 | 221 | SMART | ring_2 | 169 | 210 | IPR001841 | - | |
Lele01g1427 | 221 | Pfam | Ring finger domain | 169 | 211 | IPR001841 | - | |
Lele01g1427 | 221 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 17 | 212 | IPR044523 | - | |
Lele01g1427 | 221 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 130 | 215 | IPR013083 | - | |
Lele01g1427 | 221 | ProSiteProfiles | Zinc finger RING-type profile. | 169 | 211 | IPR001841 | - | |
Lele01g1427 | 221 | CDD | RING-H2_PA-TM-RING | 168 | 211 | - | - | |
Lele01g1427 | 221 | SUPERFAMILY | RING/U-box | 157 | 215 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele01g1427 | Lele-ChrLele01 | 8787909 | 8790030 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele01g1427 | 26 | 214 | C3H Transcription Factor Family | AT5G66070 | 30.151 | 9.06e-32 | 114 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele01g1427 | 01 | 8787909 | 8790030 | Lele01g1427 | 01 | 8787909 | 8790030 | ECH | |
Lele01g1427 | 01 | 8787909 | 8790030 | Lele03g1429 | 03 | 8680265 | 8683472 | hybridization | |
Lele01g1427 | 01 | 8787909 | 8790030 | Lele04g1698 | 04 | 21604021 | 21606266 | hybridization |