Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1424 ATGTCTTGCTCATTCGATTTTGCTTTTCTCTGTTATCGGAGTTTTCCGGCTCTTTCCGGATTTTTGATTGATTGCGAATGCGGATTGAATAACTCACGATGTTTTTCTTTTTGTTGTTTCTTGCAGCTGCTTTCTGCGTTTTCTCGTTCCTCAAGAGTTCACCAAACAAAGTACATGGTTGATTTGGAAGTTCAGCTTCCCACTCCCTTCGATCCGTTCTTAGAAGCCAAAGAATCGGATGCTCCCGGAACCAAAGGGTATGTGCATGTCAGGATACAGCAGAGGAACGGAAAAAAGAGTCTGACCACAGTTCAAGGGCTGAAGAAAGAGTTCAGCTACGAGAAGATCCTCAAGGACCTCAAGAAGGAGTTCTGCTGCAACGGCAACGTTGTGCAGGACAAGGAGCTGGGCAAGATCATTCAGCTTCAGGGTGATCAGCGCAAGAACGTCTCTCAATTCCTGGTTCAGGCTGGTCTGGTGAGAAAGGACCAGATCAAGATTCATGGTTTTTAA 513 0.4561 MSCSFDFAFLCYRSFPALSGFLIDCECGLNNSRCFSFCCFLQLLSAFSRSSRVHQTKYMVDLEVQLPTPFDPFLEAKESDAPGTKGYVHVRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVRKDQIKIHGF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1424 170 CDD eIF1_SUI1 86 169 IPR005874 GO:0003743
Lele01g1424 170 ProSiteProfiles Translation initiation factor SUI1 family profile. 88 158 IPR001950 GO:0003743|GO:0006413
Lele01g1424 170 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 64 170 - -
Lele01g1424 170 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 64 170 IPR005874 GO:0003743
Lele01g1424 170 SUPERFAMILY eIF1-like 58 170 IPR036877 GO:0003743|GO:0006413
Lele01g1424 170 Gene3D - 48 170 - -
Lele01g1424 170 FunFam Eukaryotic translation initiation factor SUI1 60 170 - -
Lele01g1424 170 Pfam Translation initiation factor SUI1 85 158 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1424 Lele-ChrLele01 8760159 8761132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1424 59 170 Eukaryotic Initiation Factors Gene Family AT5G54940 80.357 4.05e-66 196
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1424 01 8760159 8761132 Lele01g1424 01 8760159 8761132 ECH
Lele01g1424 01 8760159 8761132 Lele03g1425 03 8646798 8653107 hybridization
Lele01g1424 01 8760159 8761132 Lele04g1696 04 21584965 21585303 hybridization