Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1376 ATGTCTACATGGCCAATGGCATCATCTTCTGATTCATGGATGAAGGAATATAATGAAGCCGTGAAACTTGCTGATGATATCAGTGGCATGATTTCCGAACGGAATTCATTTCCTACATCTGGACCTGAAACCCAGCGCCATGCATCTGCTATAAGAAGGAAGATAACAATATTAGGGACCAGACTTGATAGCTTGCAATCCCTTTTGTCAAAGCTTCCTGGGAAGCAGCCTATATCTGACAAGGAGCTGAATCGGCGTAAGGACATGATTGCGAATTTGAGGTCAAAAGTTAACCAAATGGCATCAACATTGAATATGTCTAACTTTGCAAACAGGGATAGTTTGCTTGGGCCAGATACAAAACCTGATGCCATGACCAGAACAGTTGGCTTGGATAACGGGGGACTTGTTGGACTCCAAAGGCAAATTATGAGAGAGCAAGATGAGGGCCTTGAGAAATTGGAGCATACTGTAACAAGTACAAAACATATTGCATTGGCTGTAAATGAAGAACTGGATCTACACACTAGACTCATTGATGACTTGGACCAGCATGTAGATGTTACAGATTCTCGGCTGCGGAGGGTTCAGAAGAACTTGGCAATTTTGAACAAGCGTACCAAGGGTGGTTGCACCTGCTTGTGTTTGCTTTTATCAGTTGTTGGTATAGTGGTTTTGGTTGCTGTTATATTTCTGTTGATCAAATATTTGTAA 714 0.4202 MSTWPMASSSDSWMKEYNEAVKLADDISGMISERNSFPTSGPETQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISDKELNRRKDMIANLRSKVNQMASTLNMSNFANRDSLLGPDTKPDAMTRTVGLDNGGLVGLQRQIMREQDEGLEKLEHTVTSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCTCLCLLLSVVGIVVLVAVIFLLIKYL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1376 237 SMART tSNARE_6 136 203 IPR000727 -
Lele01g1376 237 Pfam SNARE domain 178 228 IPR000727 -
Lele01g1376 237 Gene3D - 143 205 - -
Lele01g1376 237 FunFam syntaxin-51 isoform X2 143 205 - -
Lele01g1376 237 CDD SNARE_Qc 144 201 - -
Lele01g1376 237 SUPERFAMILY SNARE fusion complex 132 202 - -
Lele01g1376 237 PANTHER SYNTAXIN 36 223 IPR045242 -
Lele01g1376 237 SUPERFAMILY t-snare proteins 31 105 IPR010989 GO:0016020|GO:0016192
Lele01g1376 237 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 141 203 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1376 Lele-ChrLele01 8463736 8465580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1376 6 237 SNARE and Associated Proteins AT1G16240 71.674 2.50e-124 350
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1376 01 8463736 8465580 Lele01g1376 01 8463736 8465580 ECH
Lele01g1376 01 8463736 8465580 Lele03g1387 03 8373682 8376454 hybridization
Lele01g1376 01 8463736 8465580 Lele04g1643 04 21249975 21254904 hybridization