Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1350 ATGGCTACTATTTCCACTTTCTACCCTTGCAATCCCGTTCGACCTTCTTCTTCTTCTTCATCTTTGTCTTCGAATTCGAGCAAGTGGGATCTGTTCTCAAAGTCTGCTCGTGGAAGGGGCCCACACAAGTTCGTGGGGCTCGCGGCGCATTCCAACCCTAAGATTCTGAAGACTAATCGGAAATCGAGGTTCGGACAGGCGCTATCTCCGTATGACAGCGATGCGGATGAGGATGCACTGGAAGACGAGGATGATGATGATGATTGGCTATCTGATGAAGAATCTGCAGAGCCTTCTGACTTTGATTTTAATGACAAGAAATTGAAGTCAAAGACAATAGAAGTAAACGGTAGGCAACAGGAAAAAAGGTGGGATTTGAGATCATTTGAGAGCCCTAAAGTGTTAAAAAGTGAGAAAGTGGCATCCTTTGAACCAAATGGAATTGTAAAGGTTGTCAGAAATTTAAAGGAGAACAGATATCCTCGATTGTCTGAAGAGATTAATTTGGATAAGAAATGGATTCCCCTTCTGGACTACTTAAGCACATTTGGAATGAAGGAATCGCACTTTATCCAAATGTATGAAAGGCACATGTCGTCATTTCAAATTAATGTATGTTCTGCGCAGGAAAGGTTAGAATATTTAATGAGTGTTGGTGTCAAACATAGAGATGTAAGAAGAGTCATCTTGAGACAGCCACAAATTCTGGAGTATACAGTGGAGAACAATTTAAAGGCACATGTTGCATTTTTGATGGGTTTGGGAATACCAAATTCCAGAGTAGGTCAAATAATTGCTGCTGCTCCATCCCTGTTTTCTTATAGTGTTGAAAATTCTTTAAAACCAACTGTAAGATATTTAGTTGAGGAAGTTGGCATCAAGGAAAAGGATATGAGTAAAGTCATTCAGCTGAGCCCACAAATTCTCGTTCAGCGTATTGACATTTCCTGGAATATTCGATATATGTTTCTAACCAAAGAGCTGGGAGCACCCAGAGATAGCATAGTGAAGATGGTGACCAAACATCCTCAGCTTCTCCATTATAGCATAGATGGTGGATTATTGCCTAGGATTAACTTTCTGAGGAGCATAGGAATGAGAAATTCAGACATCCTAAAAGTCCTGACTAGTCTTACACAGGTCCTTTCCCTGTCCCTGGAGGAGAATCTAAAGCCCAAGTACTTGTATCTGGTAAATGAACTTCAGAATGAGGTTCATTCCTTGACCAAATATCCAATGTACCTTAGCTTGTCTTTGGACCAGAGAATACGTCCTCGTCATAGGTTCTTGGTTTCCCTGAAGAAAGCTCCAAAAGGACCATTCCCACTTGGATCACTTGTCCCAACTGATGAATGCTTTTGTCAGCGGTGGGCAGGTACTAGTTTGGATAAGTATTTAGCTTTTCGTCAGAGGCTTTTACTCAAGAAATTTGCTGCAAAATATGAAAAATCAAAATAA 1458 0.4074 MATISTFYPCNPVRPSSSSSSLSSNSSKWDLFSKSARGRGPHKFVGLAAHSNPKILKTNRKSRFGQALSPYDSDADEDALEDEDDDDDWLSDEESAEPSDFDFNDKKLKSKTIEVNGRQQEKRWDLRSFESPKVLKSEKVASFEPNGIVKVVRNLKENRYPRLSEEINLDKKWIPLLDYLSTFGMKESHFIQMYERHMSSFQINVCSAQERLEYLMSVGVKHRDVRRVILRQPQILEYTVENNLKAHVAFLMGLGIPNSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDMSKVIQLSPQILVQRIDISWNIRYMFLTKELGAPRDSIVKMVTKHPQLLHYSIDGGLLPRINFLRSIGMRNSDILKVLTSLTQVLSLSLEENLKPKYLYLVNELQNEVHSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCQRWAGTSLDKYLAFRQRLLLKKFAAKYEKSK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1350 485 MobiDBLite consensus disorder prediction 1 104 - -
Lele01g1350 485 Gene3D Transcription termination factor 3, mitochondrial 235 472 IPR038538 -
Lele01g1350 485 Pfam mTERF 168 432 IPR003690 GO:0003690|GO:0006355
Lele01g1350 485 MobiDBLite consensus disorder prediction 74 99 - -
Lele01g1350 485 PANTHER CGI-12 PROTEIN-RELATED 173 457 IPR003690 GO:0003690|GO:0006355
Lele01g1350 485 MobiDBLite consensus disorder prediction 1 32 - -
Lele01g1350 485 SMART mt_12 226 257 IPR003690 GO:0003690|GO:0006355
Lele01g1350 485 SMART mt_12 262 294 IPR003690 GO:0003690|GO:0006355
Lele01g1350 485 SMART mt_12 372 404 IPR003690 GO:0003690|GO:0006355
Lele01g1350 485 SMART mt_12 299 331 IPR003690 GO:0003690|GO:0006355
Lele01g1350 485 SMART mt_12 336 367 IPR003690 GO:0003690|GO:0006355
Lele01g1350 485 SMART mt_12 405 436 IPR003690 GO:0003690|GO:0006355
Lele01g1350 485 FunFam Transcription termination factor MTERF9, chloroplastic 237 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1350 Lele-ChrLele01 8289163 8291854 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele01g1350 mTERF 1.5e-41 No_clan