Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1341 ATGGATTCTTTTTGGCAGCTTCGTTCCTTTTTGGTTCTGTTCTTCATTGGTCTCACCATCACCCCAGCCACCCCACAGCCACAACCACGATTTTGCAATGACTCTTCTATCCATCATCCCTGCAACTATCATTCTTCAAATACCTCCAAGTTTGGCAATCATGTTCAGCAACAAGGGTCAGTTTCAGGACCAAATATCAAATCTTTTAGTCATCAGATAGATTCTGTCACTGTCCAAGTTTCCAATGATGATGATGATACTGAGAATTCAGATAACTCACAGATTTCAATCACAAAAGCTCATGGAATATTGAGTGGAATAGGGTGGGGGATTCTGATGCCAATTGGTGCAATGATGGCTCGTTATTTGAAACCATTCGAAGCTTCTAGATCTTCCTGGTTTAATCTCCACAGAGCTTGCCAGATTCTAGCATACATAACTGGAACCACTAGCTTGGCCCTAGGAATCTACATTGGAATCACGAGCGAACATTTTTCTGTTCATGGCTACATTGGGTTCGCTATATTCTTTGCTTCTACTATTCAAATGGTTCTAGCTTTGAATTACAGGCCTAAGGAAGATGACAAGAACAGAATCTTCTGGAACATTCTTCACTATCTCATTGGTTATGGAGTCATCGTTCTCTCCATCTTCGATATTTTCAAAGGATTCTCCATTTCAAGCTCCTATCATCATCATCATGGGTCGACATGGAAGAATGCTTTCTTAGGGATCATAGTTTCATTGGGTTGTGTAGCTTTCATATTGGAAGTCACTACTTGGTTTCTGGTGTGCAAGAACAGGAAGAGGAAGATGAAGAAGGAAGAGGAAGATGAGAATTCTGCTGACGCTGCATTGGATGTGCATTTCCTAGGCTCCCGCTGTGCTCACACTTTCCATGTCCATGGCGATTTCTGGTGCCCTCCTGGTGTTCTGTTGACTTCCTCCGGTCTTTCCTTCAAGATGGCCACAAATGATCGCCGTTTTGTAGAATGGAAGGAGCAGTTTATTTCACAGGAACGTGGCAACCGTGTAGTCCACTATTACCTGAAGGATTCTGCTGGGGATTCCATACTTGCAGTTGTGGGCACTGAGAGGAGCCTGAGACACATGTTCTATGTTGTTGCTGGCGAGTTTCTCGAAGTTTGTGGGAAGGAGGGTGCCATACATGCAGGTTTCAAATGGAGGTCCAGAAGAGAGGTGGTGGATTGGTTGACATCAATGCTATCAAAGCAGCATCAGCTGGGAGACAAGAGTGTGTCGCCAAGTCATAACTTGACACAAGCTCATGAGAACACAAATGGCAGTCTCAAAGAATTTATTGATTTGCATACACAGATATCAGATAAGGGCCTTCTAATGAGCAGCTTCAAAGGACAAAATTCTGACATTGTTTGGTCAGGCGTTGCCTGGACATGTGGCAAACAGCTTAAACATTATCCTGCTTTTTCCAGAAATGGGATCAAAATAGCTATTCAATCTTTCGTCTTTGTCATGGCAACGGGAGAGAATCGTTATATTGCATATTTGGAGGACATGTACGAAGACAGGAGGGGTCAGAAAAAAGTTAAAGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTAATTCCCGTGAGAAATCCTCACCCTCAAGAAGTTTTTATCACATCTTATTCTCAAGTGATTAGTGCTGAGTGTGTTGATGGCCCGGCCACAGTCTTAACTCGGGAACATTATGAAAAACTCTTGCCTGCCTTTTCTCCTGCGTCATCAAATAGAATCCATTTGTGCTTTAGGCAATTTAGAAACAACAAAGTGAAGGCCTTTGACTTGAGTAAATTGCGTGGCTACCATGATCAACCAATTCTCTCTTGCTTGAACCTTGATTCGTTCCAAAACCCTAAATCTAATAACCTTGCAGAAGAGGATGAAGAGTTGAGCCTAGGTGACGATGTAAGGCCTGAAAGTAAGAGGAGCAAAAGAGGTAGAGGGTCTTCTCAGCATTTGGTAGATCACCGAGCTAGGAAATTAAGTAGAAATCAACAAATGATGGTGGACAAAACCATCGAGAATGTAGATTATGCTAGGCCAGATAGGAGATTACTTTCCCAGAAACAGGTTGATTATCAGCCCGGGTATAGCTCCAAATACAAAGTTGATGACAAGATAGAGTTACTCTGTCAAGACAGTGGCATCCGAGGCTGCTGGTTCAGGTGTACAGTTGTGCAAGTATCCCGGAAACAGATAAAAGTCCAATACAATGATGTGCAGGATGAAGATGGAGGCGGCAATCTTGAGGAATGGATCCCTGCTTTCAAACTTGCCATGCCTGATAAACTTGGGATGAGACATTCTGGTCGGCCTACCATCAGGCCAGCCCCAACTCATCAGGGGCAACAAGAACTGGCTATTGAGATCGGAACTGCAGTAGATGCATGGTGGAGTGATGGTTGGTGGGAGGGGGTTGTAAGTGGAATTGACTATGGCGATGATGATAATGTCCAAGTTTACTTTCCCGGTGAAGGTCTGTTAAGGAAAGTATGCAAGAAGGATCTAAGAGTGTCGAGAGATTGGCTGGGAGACCGATGGGTTGATATTGAGCTAAAGCCTAATGTAGCCTCTACCATATCTGCAGTTAATAGGTCTAACACAAAGTTTTCAGCGTCCCCATCTACCACTAAAGACGTTGACTCTTCTGGGGTTGTTATTTCATGTCAAGATGTTCCTGTTAGTGAGAAATCTGATGAACCAAACGATGTTGCTGAAGACATGAATCAGGTTATTGATAACAAGCCTCCTTCACAAGAAGAGACAAGTACTGAAGTTGTTGAGACTGAGCAACATGGAAGTTGCGATAATGGCAACTATAACGGAGATAACCATGACGACAACAAAGATGATAAGGAAGATAATGATGGCGATGATAACAAAAGGTTTGATAATGATGTGAAGGATATGGAGGTGCTTGGGACTTCTGGGGAGGACTCGAGAACCGTGGAACCCATGGAAGTCACTGTTTAA 3006 0.4335 MDSFWQLRSFLVLFFIGLTITPATPQPQPRFCNDSSIHHPCNYHSSNTSKFGNHVQQQGSVSGPNIKSFSHQIDSVTVQVSNDDDDTENSDNSQISITKAHGILSGIGWGILMPIGAMMARYLKPFEASRSSWFNLHRACQILAYITGTTSLALGIYIGITSEHFSVHGYIGFAIFFASTIQMVLALNYRPKEDDKNRIFWNILHYLIGYGVIVLSIFDIFKGFSISSSYHHHHGSTWKNAFLGIIVSLGCVAFILEVTTWFLVCKNRKRKMKKEEEDENSADAALDVHFLGSRCAHTFHVHGDFWCPPGVLLTSSGLSFKMATNDRRFVEWKEQFISQERGNRVVHYYLKDSAGDSILAVVGTERSLRHMFYVVAGEFLEVCGKEGAIHAGFKWRSRREVVDWLTSMLSKQHQLGDKSVSPSHNLTQAHENTNGSLKEFIDLHTQISDKGLLMSSFKGQNSDIVWSGVAWTCGKQLKHYPAFSRNGIKIAIQSFVFVMATGENRYIAYLEDMYEDRRGQKKVKVRWFHHNQEVKGVIPVRNPHPQEVFITSYSQVISAECVDGPATVLTREHYEKLLPAFSPASSNRIHLCFRQFRNNKVKAFDLSKLRGYHDQPILSCLNLDSFQNPKSNNLAEEDEELSLGDDVRPESKRSKRGRGSSQHLVDHRARKLSRNQQMMVDKTIENVDYARPDRRLLSQKQVDYQPGYSSKYKVDDKIELLCQDSGIRGCWFRCTVVQVSRKQIKVQYNDVQDEDGGGNLEEWIPAFKLAMPDKLGMRHSGRPTIRPAPTHQGQQELAIEIGTAVDAWWSDGWWEGVVSGIDYGDDDNVQVYFPGEGLLRKVCKKDLRVSRDWLGDRWVDIELKPNVASTISAVNRSNTKFSASPSTTKDVDSSGVVISCQDVPVSEKSDEPNDVAEDMNQVIDNKPPSQEETSTEVVETEQHGSCDNGNYNGDNHDDNKDDKEDNDGDDNKRFDNDVKDMEVLGTSGEDSRTVEPMEVTV 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1341 1001 MobiDBLite consensus disorder prediction 924 952 - -
Lele01g1341 1001 CDD Cyt_b561_FRRS1_like 75 258 - -
Lele01g1341 1001 SMART BAH_4 488 608 IPR001025 GO:0003682
Lele01g1341 1001 MobiDBLite consensus disorder prediction 924 1001 - -
Lele01g1341 1001 ProSiteProfiles Cytochrome b561 domain profile. 64 265 IPR006593 -
Lele01g1341 1001 Pfam Agenet domain 715 789 IPR008395 -
Lele01g1341 1001 ProSiteProfiles BAH domain profile. 488 607 IPR001025 GO:0003682
Lele01g1341 1001 Gene3D - 457 621 IPR043151 -
Lele01g1341 1001 Pfam Eukaryotic cytochrome b561 101 225 IPR006593 -
Lele01g1341 1001 SMART 561_7 100 224 IPR006593 -
Lele01g1341 1001 SMART agenet_At_2 797 855 IPR014002 -
Lele01g1341 1001 SMART agenet_At_2 710 775 IPR014002 -
Lele01g1341 1001 Gene3D - 76 275 - -
Lele01g1341 1001 MobiDBLite consensus disorder prediction 634 676 - -
Lele01g1341 1001 MobiDBLite consensus disorder prediction 645 675 - -
Lele01g1341 1001 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 49 275 - -
Lele01g1341 1001 MobiDBLite consensus disorder prediction 953 986 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1341 Lele-ChrLele01 8223864 8231041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1341 724 853 PHD Transcription Factor Family AT5G58610 27.820 1.17e-10 63.9