Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1340 ATGGGGTTATCTAAAGTTTCAGTTTTTCCACTTTTGGTTGTCTGGGTTTGTGTTCAGTTGAATTCAGCAGAAGGTCTCTCATCTTACTATTCCTACGACCAAAACAATGTCAGAAACTACATTAGCTGGAAGGATCTGTGGGTGGACGAACAGAGGTTGACTTGGCGCCCCATTGAAGATGCTCGCGTTATTGTCGTTGACCAGGATGGCAGAGGACATTCTAGGACTGTACAAGGAGCTGTAGATATGGTCCCTGATAACAACTCAGAAAGAATCAAAATTTACATATACCCTGGAATTTACAGAGAGAGAGTGTATGTTCCAAGAACGAAAGGGTATGTATCAATGATAGGAGGACGAAATGGAGCAGAGAGTGCAGTAATTACATGGAACAGTAAATCATCAGACAGAGGTTTTGATGGACAAGAACTTGGGACCTATGCTTCTGCCACTGTCACTGTAGAATCTGATTACTTCTGTGCAACCACGCTCACTTTTGAGAACTCGGTGGAGGCCGTGAATGGAGAATATGGAATGCAAGGAGTGGCACTGAGGGTGGACAGTGAAAGGGCCATGTTTTATAGGGTGAGGATCAAAGGGGAACAAGATACTCTGTTGGATAACACAGGCACTCATTATTTCTATCAGTGTCAAATCCAGGGCAAAATTGATTTCATATTTGGCAATGCAAAATCACTCTATCAGAACTGTGATATTCATTCAATAGCAGAGACATATGGAGCAATAGCAGCACATCACAGGAATGCAGAAGATGAAGAGACAGGCTTCTCCTTTGTAAATTGCTCAATCACAGGCACTGGCAGTGTTTACCTTGGCAGAGCCTGGGGTGATTATTCTAGAATCATCTACTCTCTCTGCTATATGAATGGTATCATTATCCCTGAAGGCTGGACTGAATGGAATCACCCATCCAGAAAGATGACTGCTATGTTTGGGGAGCACCAGTGTGTGGGAATGGGAGCAGATAGGAGAGGAAGGGTAGAATGGTCAAAATCTTTGAGCTATGAGGAAGCAAGGCCTTTTCTGGATAAGATTTTCATTAATGGGGACCAGTGGCTTATGCTATAG 1089 0.4334 MGLSKVSVFPLLVVWVCVQLNSAEGLSSYYSYDQNNVRNYISWKDLWVDEQRLTWRPIEDARVIVVDQDGRGHSRTVQGAVDMVPDNNSERIKIYIYPGIYRERVYVPRTKGYVSMIGGRNGAESAVITWNSKSSDRGFDGQELGTYASATVTVESDYFCATTLTFENSVEAVNGEYGMQGVALRVDSERAMFYRVRIKGEQDTLLDNTGTHYFYQCQIQGKIDFIFGNAKSLYQNCDIHSIAETYGAIAAHHRNAEDEETGFSFVNCSITGTGSVYLGRAWGDYSRIIYSLCYMNGIIIPEGWTEWNHPSRKMTAMFGEHQCVGMGADRRGRVEWSKSLSYEEARPFLDKIFINGDQWLML 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1340 362 SUPERFAMILY Pectin lyase-like 61 360 IPR011050 -
Lele01g1340 362 Pfam Pectinesterase 64 357 IPR000070 GO:0030599|GO:0042545
Lele01g1340 362 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 59 360 - -
Lele01g1340 362 Gene3D - 62 362 IPR012334 -
Lele01g1340 362 FunFam Pectinesterase 59 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1340 Lele-ChrLele01 8221333 8223080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1340 5 313 Carbohydrate Esterase AT5G55590 55.152 1.44e-127 367