Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1327 ATGGAAGGTTCAGGAAGTCCCTTCTTTCCCTCTGGCCACCACCAACCTGCAAGCTCAAGCTCTGGTGTTATCATTCATCACCAACCTCCAACTGCAAGCTCTGGGTACTCCATATGTTCTTTTGCATTTCTGGAATCTGAGGATTCTGAACATGACAGTCATAAGAATGATCCAGTACACGCTGTGATCTGCTTTTTAGCCAGAAACGTTTTTTTCCACCTATTGAAGAATAGTTTTGTCTTATGTGCCTTCTTCTTCTTATCTGCGTCGTCAGCGAACCCTGCCGGACAAGGCGGAGCTCCAGAGAACCCAAATCAGAATCAGCCTGCGCAGTGCGGGATGATGAGAGAACAGGACCAGTACATGCCGATCGCGAACGTCATCAGAATCATGCGTCGGATCCTTCCGGCGCACGCTAAGATCTCCGATGAAGCCAAAGAGACGATCCAAGAATGCGTCTCTGAGTACATCAGCTTCATTACCAGCGAGGCGAACCAGCGGTGCCGGCAGGAGCAGCGTAAGACGGTGACGGCGGACGACCTGCTTTGGGCAATGGAGAAGCTGGGCTTCGACAACTACGTGGGGCCTCTCTCTCTCTATCTCCACCGTTACCGTAATGGCGAGGGTGGTTTCGGTGGCCACTATGCCCCACGGGCGCAGCCGCCGCAAGTGCAGGCTCCTCCAGAGCTCCCACCAGCAGTGCCACCACTCCCGCAGCCACCGTACTATTACGGGCCGGGTTATAATTATCCAGTGTCGCCGAATCAGATGGGGTCGTCCGGTGCTGGTAGCTCAAGCGGTGGTGGTGGTGGTGCTCCAGCATATTATGATCCGTTTGCTCACCTGAGAAATGACCATTTCTGA 864 0.5359 MEGSGSPFFPSGHHQPASSSSGVIIHHQPPTASSGYSICSFAFLESEDSEHDSHKNDPVHAVICFLARNVFFHLLKNSFVLCAFFFLSASSANPAGQGGAPENPNQNQPAQCGMMREQDQYMPIANVIRIMRRILPAHAKISDEAKETIQECVSEYISFITSEANQRCRQEQRKTVTADDLLWAMEKLGFDNYVGPLSLYLHRYRNGEGGFGGHYAPRAQPPQVQAPPELPPAVPPLPQPPYYYGPGYNYPVSPNQMGSSGAGSSSGGGGGAPAYYDPFAHLRNDHF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1327 287 FunFam Nuclear transcription factor Y subunit B-6 110 222 - -
Lele01g1327 287 SUPERFAMILY Histone-fold 118 210 IPR009072 GO:0046982
Lele01g1327 287 MobiDBLite consensus disorder prediction 11 26 - -
Lele01g1327 287 PRINTS CCAAT-binding transcription factor subunit A signature 168 186 - -
Lele01g1327 287 PRINTS CCAAT-binding transcription factor subunit A signature 187 205 - -
Lele01g1327 287 PRINTS CCAAT-binding transcription factor subunit A signature 149 167 - -
Lele01g1327 287 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 122 185 IPR003958 -
Lele01g1327 287 Gene3D Histone, subunit A 111 217 IPR009072 GO:0046982
Lele01g1327 287 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 100 209 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lele01g1327 287 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1327 Lele-ChrLele01 8109704 8111384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1327 81 212 CCAAT-HAP3 Transcription Factor Family AT5G47670 63.636 1.04e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lele01g1327 CBFD_NFYB_HMF 2.5e-24 CL0012