Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1296 ATGCCTGCAAGCTTAAGAAATCCCTCACTTCTCTCAATAAACTCTCTTCTCTGCTTCTCCTTCTCCTTCTCCTTCTTCTTCTTCTCATGTTGCTACTCCATTGATGAACAAGGCCAAGCTCTTCTTGCATGGAAGAACAGTTTGAACAGTACAGGAGATGCTGTGTTAGCATCATGGAGTCCTTCAGATTCAAGCCCTTGCAAATGGCATGGTGTTCTCTGCAACGCCAGAGGAGATGTGGAGGAGATAAGCTTGAAATCTGTGGACCTGAAAGGCTCATTGCCTTCAAATTTTCAAGCTTTCAAGTCTTTGAAGGTTCTTGTGCTGTCATCAACCAACCTCACAGGTTCTATCCCAAGAGAAATTGCAGACTGTGGAGAGCTTGTTTCTATTGATCTCAGTGGGAATTCTCTCTCAGGTGAAATACCAGAAGATATTTGCTGGCTGAGTAAACTTGAGAGTTTGTCTCTCCATTCAAACTTTCTTGAAGGTAATATTCCATCCAACATTGGGAATCTCTCTAGTCTTGTGAATTTGACACTCTATGACAACAAGCTCAGTGGTGAAATCCCAAAGAGTTTGGGGTTTTTAAGAAGTCTTCAAGTTTTCAGAGCAGGTGGGAATAAGAACCTTAAAGGTGAGCTGCCATGGGGGATTGGAAACTGCACCAGCTTGGTCATGTTGGGCCTTGCAGAAACCAGCATTTCTGGGAGCCTTCCTTCTTCAATAGGAATGCTGAGGAACATTCAAACCATAGCTATTTACACAACGCTCTTGTCAGGCTCAATTCCGGAGGAGATTGGGAATTGCAGTGAGCTGCAGAATTTGTATTTGTATCAGAACTCTATTTCAGGTCCAATCCCAAGTCAACTTGGAAATCTCAGAAAGCTTCAGAGTATTCTCTTATGGCAGAATAATCTAGTGGGGACAATCACAGAAGATCTTGGAAGCTGCACAGAGCTCAAAGTCATAGACTTTTCAGAAAACCTCCTCACTGGAAGCATACCAAGGAGCTTTGGGAAGCTTTCAAATATTGAAGAAATCCAGCTAAGTGTTAATCAGTTGACAGGTATTATACCTCCTGAGATTACAAACTGCACTTCTCTGACTCAATTGGAAGTTGACAACAATGCTCTTTCTGGAGAGATTCCTGCTCTTATAGGCAACTTGAAAATCTTGAATCTTTTCTTTGCATGGCAGAACAATCTCACTGGGAAAATCCCAGATAGTCTCTCTGAGTGCCAAGATCTTGAGGCACTTGATCTGTCTTACAACAATCTGATTGGTTCAATACCAAAATCAATTTTTGGGTTGAGGAATCTCACTAAACTCTTGCTTCTTTCCAATGAATTATCAGGCTTTGTTCCTCCTGATATAGGAAACTGCACAAGTCTCTACAGGTTAAGGTTGAACAGAAATAGATTTTCTGGGTTCATTCCACCTGAGATTGGAACCTTGAAGAACCTCAACTTTATGGATATGAGCAAAAATCACTTTGTGGGGAAGATTCCTTCAACATTATCTGGATGCGAGAACCTTGAGTTCATTGATCTTCATTCAAATTCTCTCACTGGCTCAATACCAGAGGCTCTCCCCAGAAGTCTTCGATTGGTGGATTTCTCAGATAATAGGCTCACAGGTTCGTTGAGTCGTACCATTGGTTCCTTGAGTGAACTAACAAAACTCAATCTGGGAAAGAACCAACTCAGTGGGAAAATCCCAGAAGAGATTTCATCTTGTTCTAAGCTTCAACTTCTTGACCTTGGAAGCAATGATTTCGCTGGAGAAATTCCAGAGCAATTGGGTCAAATCCCATCATTGGAAATCTCTTTAAATCTCAGCTTTAATCAATTTTCTGGGCAAATCCCATCTCAAATCTCTAGTCTCACTAAACTGGGTGTTCTTGATATCTCCCACAACAACCTCTCAGGGAATCTAAATTCTCTCTCTGACCTTCAAAACCTCGTTTCCTTAAACGTGGCCTTCAACTATTTCTCTGGTGAATTACCCGACACCCCATTTTTCAAAAAGCTTCCTTTAAGTGACCTGACCCCGAATAAAGGCCTCTACATCGCCGGCGGCGACGGTTTGACTCCGGTCGACGGAGTGGGACCCAGTAAAGTCCATGCCAGATCAACAATGAAGTTCATCATGTCCATTCTCTTAAGCACAAGTGCAGTACTTGTACTACTCACAATCTATGCTTTGGTACGTTCTCATATTCAAAACAGGGCAATAATGGAAGATAGTTCATGGGAGATGACTTTTTATCAGAAGCTCGAAATCTCCTCCATTGATGATGTCATCAAGAGCCTGACGTCATCCAACGTGATCGGCACGGGAAGCTCCGGCGTGGTGTACAGGGTAACAATCCCCACCAGCTCCATCGGGGAACTAGCCGTTAAAAAGATGTGGTCTTCAGAAGAATCCGGTGCATTCGAATCCGAGATTCGAACTCTGGGTTCAATCCGACACAAGAACATCGTCAGACTCCTAGGTTGGGGATCCAACAAGAACATCAAGCTTCTCTTCTACGACTACCTCCCCAACGGCAGCCTCAGCTCGATGCTTCACGGTTCCGGAAAAGGATGTGCAGATTGGGAAACCAGGTACGAGGTTGTGGTCGGTGTAGCTCACGCGCTGGCTTATTTACACCACGATTGCGTCCCTCCAATTCTCCACGGAGACGTCAAAGCCATGAACGTGTTATTGGACGACAGGTTTCAAGCTTATCTCGCAGATTTCGGCTTAGCGAGAATCGTTCATGAAAAAGACGACGCTCATCATCATCATCATTCTGATCCTAAACCACTTCATAAAACATATCTCGCTGGTTCTTACGGTTACATGGCTCCAGAACATGCATCGATGCAGAGGATCACAGAGAAAAGTGACGTGTATAGTTATGGTGTGGTTCTATTGGAGGTGTTGACTGGGAGGCATCCACTGGACCCGACTCTACCAGGTGGTGCACACATGGTTCAGTGGGTTCGGAACCACTTAGCCAATAAAGGAGAGCCATCTGATATTTTGGACCCAAAGCTGAGAGGGAGGGCTGACCCAGCCATGCATGAGATGCTTCAGACTTTGGCTGTGTCGTTTCTGTGTGTCAGCACCAAGCCTGAGGATCGTCCTACGATGAAGGACGTTGTGGCTATGCTTAAAGAAATCAGACCTGTTGATCAGTCCTCAAGGTTGGATTCTGATGAACTGAAGAAGAAGGCTAAATCTTCGTTACATGGCTCACCATATCCAGTTCCACCACCTAAGCGTCTCGTCTCGCATCAGTCTTCTAACTGTTCATTTCATTTCTCAGATGACTCAGTCTAA 3330 0.442 MPASLRNPSLLSINSLLCFSFSFSFFFFSCCYSIDEQGQALLAWKNSLNSTGDAVLASWSPSDSSPCKWHGVLCNARGDVEEISLKSVDLKGSLPSNFQAFKSLKVLVLSSTNLTGSIPREIADCGELVSIDLSGNSLSGEIPEDICWLSKLESLSLHSNFLEGNIPSNIGNLSSLVNLTLYDNKLSGEIPKSLGFLRSLQVFRAGGNKNLKGELPWGIGNCTSLVMLGLAETSISGSLPSSIGMLRNIQTIAIYTTLLSGSIPEEIGNCSELQNLYLYQNSISGPIPSQLGNLRKLQSILLWQNNLVGTITEDLGSCTELKVIDFSENLLTGSIPRSFGKLSNIEEIQLSVNQLTGIIPPEITNCTSLTQLEVDNNALSGEIPALIGNLKILNLFFAWQNNLTGKIPDSLSECQDLEALDLSYNNLIGSIPKSIFGLRNLTKLLLLSNELSGFVPPDIGNCTSLYRLRLNRNRFSGFIPPEIGTLKNLNFMDMSKNHFVGKIPSTLSGCENLEFIDLHSNSLTGSIPEALPRSLRLVDFSDNRLTGSLSRTIGSLSELTKLNLGKNQLSGKIPEEISSCSKLQLLDLGSNDFAGEIPEQLGQIPSLEISLNLSFNQFSGQIPSQISSLTKLGVLDISHNNLSGNLNSLSDLQNLVSLNVAFNYFSGELPDTPFFKKLPLSDLTPNKGLYIAGGDGLTPVDGVGPSKVHARSTMKFIMSILLSTSAVLVLLTIYALVRSHIQNRAIMEDSSWEMTFYQKLEISSIDDVIKSLTSSNVIGTGSSGVVYRVTIPTSSIGELAVKKMWSSEESGAFESEIRTLGSIRHKNIVRLLGWGSNKNIKLLFYDYLPNGSLSSMLHGSGKGCADWETRYEVVVGVAHALAYLHHDCVPPILHGDVKAMNVLLDDRFQAYLADFGLARIVHEKDDAHHHHHSDPKPLHKTYLAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGRHPLDPTLPGGAHMVQWVRNHLANKGEPSDILDPKLRGRADPAMHEMLQTLAVSFLCVSTKPEDRPTMKDVVAMLKEIRPVDQSSRLDSDELKKKAKSSLHGSPYPVPPPKRLVSHQSSNCSFHFSDDSV 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1296 1109 ProSiteProfiles Protein kinase domain profile. 772 1057 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1296 1109 Pfam Leucine rich repeat 320 379 IPR001611 GO:0005515
Lele01g1296 1109 Pfam Leucine rich repeat 533 593 IPR001611 GO:0005515
Lele01g1296 1109 Gene3D Phosphorylase Kinase; domain 1 734 847 - -
Lele01g1296 1109 FunFam Putative LRR receptor-like serine/threonine-protein kinase 610 695 - -
Lele01g1296 1109 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 194 285 - -
Lele01g1296 1109 MobiDBLite consensus disorder prediction 1092 1109 - -
Lele01g1296 1109 ProSitePatterns Serine/Threonine protein kinases active-site signature. 892 904 IPR008271 GO:0004672|GO:0006468
Lele01g1296 1109 MobiDBLite consensus disorder prediction 1062 1077 - -
Lele01g1296 1109 FunFam Leucine-rich receptor-like protein kinase family protein 34 193 - -
Lele01g1296 1109 Gene3D Ribonuclease Inhibitor 336 431 IPR032675 -
Lele01g1296 1109 SMART LRR_sd22_2 149 175 - -
Lele01g1296 1109 SMART LRR_sd22_2 629 654 - -
Lele01g1296 1109 SMART LRR_sd22_2 318 347 - -
Lele01g1296 1109 SMART LRR_sd22_2 270 296 - -
Lele01g1296 1109 SMART LRR_sd22_2 556 579 - -
Lele01g1296 1109 SMART LRR_sd22_2 414 440 - -
Lele01g1296 1109 SMART LRR_typ_2 149 173 IPR003591 -
Lele01g1296 1109 SMART LRR_typ_2 556 580 IPR003591 -
Lele01g1296 1109 SMART LRR_typ_2 629 652 IPR003591 -
Lele01g1296 1109 SMART LRR_typ_2 438 462 IPR003591 -
Lele01g1296 1109 SMART LRR_typ_2 342 366 IPR003591 -
Lele01g1296 1109 SMART LRR_typ_2 294 318 IPR003591 -
Lele01g1296 1109 ProSitePatterns Protein kinases ATP-binding region signature. 778 803 IPR017441 GO:0005524
Lele01g1296 1109 Gene3D Ribonuclease Inhibitor 532 609 IPR032675 -
Lele01g1296 1109 Gene3D Ribonuclease Inhibitor 432 531 IPR032675 -
Lele01g1296 1109 Gene3D Ribonuclease Inhibitor 610 693 IPR032675 -
Lele01g1296 1109 Gene3D Ribonuclease Inhibitor 233 335 IPR032675 -
Lele01g1296 1109 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 848 1073 - -
Lele01g1296 1109 SUPERFAMILY Protein kinase-like (PK-like) 755 1054 IPR011009 -
Lele01g1296 1109 ProSiteProfiles Leucine-rich repeat profile. 631 653 IPR001611 GO:0005515
Lele01g1296 1109 SUPERFAMILY L domain-like 131 528 - -
Lele01g1296 1109 MobiDBLite consensus disorder prediction 1062 1109 - -
Lele01g1296 1109 FunFam Putative LRR receptor-like serine/threonine-protein kinase 756 847 - -
Lele01g1296 1109 FunFam Leucine-rich receptor-like protein kinase family protein 337 609 - -
Lele01g1296 1109 Gene3D Ribonuclease Inhibitor 36 150 IPR032675 -
Lele01g1296 1109 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 510 1055 - -
Lele01g1296 1109 Gene3D Ribonuclease Inhibitor 152 232 IPR032675 -
Lele01g1296 1109 SMART serkin_6 772 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1296 1109 Pfam Protein kinase domain 775 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1296 1109 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Lele01g1296 1109 SUPERFAMILY L domain-like 439 687 - -
Lele01g1296 1109 Pfam Leucine rich repeat N-terminal domain 35 75 IPR013210 -
Lele01g1296 1109 Gene3D Transferase(Phosphotransferase) domain 1 848 1080 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1296 Lele-ChrLele01 7898513 7901958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1296 31 1109 Receptor kinase-like Gene Family AT5G56040 66.359 0.0 1412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele01g1296 Pkinase 1.3e-37 CL0016