Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1294 ATGCCCATCCTTCTCCTCCTCCATCATCATATATCTCTCTATTCAATCCCCGTAATTCAATATATACCGTTTGCCTTCTCTCTATTTCCTTCTTCTCAAAATCTCCCCCCTTCACCTACCAATTCGGGGTTCTTCAGGTCTTTGCCAATAAAATATAAATCTCCTATATATCTAATGGAGTCATCCTCTGGGGTTCATTTTTCTGGATTTCACATGAATGGTTCAGCACAGAGGGATGCTGGCGCAGAGCAACCTACAACTTCAGCTACTGACATGTATAAACAACCTTTTGTCATAGGTGTTGCTGGGGGAGCGGCATCTGGCAAGACTACAGTTTGTGATATGATTATTCAGCAGCTTCATGACCAACGAGTTGTACTTGTTACTCAGGATTCTTTTTATCATAATTTGACTGAAGAGGAACTTACAAGAGTTCAAGATTACAACTTTGACCATCCTGATGCTTTTGATACTGAGGAATTATTACGGGCTATGGATAAGTTAAGGCATGGACAAGCTGTAGATATTCCAAACTATGACTCAAAGAGTTACAAGAGTGATGCGTTTCCAGCAAGAAGGGTGAATCCTTCAGATGTTATAATTTTGGAAGGAATTCTTATTTTCCATGATCCACGTGTTCGGGAGCTGATGAATATGCAGATATTTGTCGACACAGATGCTGATGTTCGTTTGGCTAGGAGAATTAGGCGTGATACTTGTGAGAAGGCTCGGGATATTGGCTTAGTGCTTGATCAGTATTCTAAATTTGTAAAGCCGGCTTTTGATGACTTTATTCTTCCAACAAAGAAATATGCTGATATCATCATACCCCGCGGAGGAGATAATCACGTGGCTATTGATTTGATCGTACAGCATATCCGAACAAAGCTTGGTCAACATGATTTGTGTAAAATATATCCTAATTTATATGTCATTCAAACAACTTTTCAGATAAGGGGTATGCACACCCTGATACGTGATTCTCAGACAACGAAACATGATTTTGTGTTTTATGCTGACCGTTTGATTCGTTTGGTTGTTGAACATGGCCTGGGGCATCTTCCATTTACGGAAAAGCAAGTAATAACTCCAACTGAATCTGTATATACTGGTGTGGATTTTTGCAAGAGGTTATGTGGTGTCTCTGTTATCAGGAGTGGAGAGAGTATGGAAAATGCTTTACGTGCATGCTGTAAAGGTATCAAGATTGGTAAAATTCTTATTCATAGAGAAGGTGACAATGGTCAGCAGCTAATATATGAGAAGTTGCCCAACGATATCTCAGATAGACATGTGTTACTATTGGATCCTATCCTAGGAACAGGTAATTCTGCTGTTCAAGCAATTTCTTTGCTTCTCAGAAAGGGTGTTCCAGAGTCCAACATTATATTTCTCAACCTCATATCCGCACCTCAAGGTGTGCACATGGTCTGCAAGAAATTTCCAAGAATAAAGATAGTGACATCTGAGATTGATTTTGGTTTGAATGAAGATTTTCGTGTTGTACCTGGCATGGGTGAGTTTGGGGACCGTTATTTTGGAACAGATGATGATGACGACCAACAAGTGGTGGCCCCTTCACAAGAGTGA 1590 0.4013 MPILLLLHHHISLYSIPVIQYIPFAFSLFPSSQNLPPSPTNSGFFRSLPIKYKSPIYLMESSSGVHFSGFHMNGSAQRDAGAEQPTTSATDMYKQPFVIGVAGGAASGKTTVCDMIIQQLHDQRVVLVTQDSFYHNLTEEELTRVQDYNFDHPDAFDTEELLRAMDKLRHGQAVDIPNYDSKSYKSDAFPARRVNPSDVIILEGILIFHDPRVRELMNMQIFVDTDADVRLARRIRRDTCEKARDIGLVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQTTFQIRGMHTLIRDSQTTKHDFVFYADRLIRLVVEHGLGHLPFTEKQVITPTESVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLLRKGVPESNIIFLNLISAPQGVHMVCKKFPRIKIVTSEIDFGLNEDFRVVPGMGEFGDRYFGTDDDDDQQVVAPSQE 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1294 529 Pfam Phosphoribulokinase / Uridine kinase family 98 284 IPR006083 GO:0005524|GO:0016301
Lele01g1294 529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 289 IPR027417 -
Lele01g1294 529 Gene3D - 92 299 IPR027417 -
Lele01g1294 529 TIGRFAM udk: uridine kinase 95 296 IPR000764 -
Lele01g1294 529 Gene3D - 300 515 IPR029057 -
Lele01g1294 529 SUPERFAMILY PRTase-like 299 516 IPR029057 -
Lele01g1294 529 PRINTS Uridine kinase signature 264 277 - -
Lele01g1294 529 PRINTS Uridine kinase signature 96 113 - -
Lele01g1294 529 PRINTS Uridine kinase signature 228 238 - -
Lele01g1294 529 PRINTS Uridine kinase signature 126 137 - -
Lele01g1294 529 PRINTS Uridine kinase signature 171 186 - -
Lele01g1294 529 PRINTS Uridine kinase signature 242 253 - -
Lele01g1294 529 CDD PRTases_typeI 373 488 IPR000836 -
Lele01g1294 529 FunFam Uridine kinase 300 515 - -
Lele01g1294 529 PANTHER URIDINE KINASE 86 425 - -
Lele01g1294 529 Pfam Uracil phosphoribosyltransferase 314 515 - -
Lele01g1294 529 CDD UMPK 98 296 IPR000764 -
Lele01g1294 529 FunFam Uridine kinase 93 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1294 Lele-ChrLele01 7883425 7889984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1294 53 518 PRT Gene Family AT4G26510 83.333 0.0 807
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1294 01 7883425 7889984 Lele04g1558 04 20494122 20500238 hybridization