Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1282 ATGCCCCTCAGGGCAGACTATCTAGAGAACGAGATAAAAATGTTTCGGAGCAGAGTGGCCTGGTCACTTTTGAGGCGCAGTAGAGATGTAATTGGGACCTACAAACTGAGAGGAACAAGGCCAAATACAAGTTTTTCGGCCGAGGATTCGTCAAGGTTTTTTTACCCGTCCATCGCCCGCCAATATTTACATTTTTTTGGATCTCAGACTAAGGGTCACAATGTGCCATACATGAGGAGCTTTTGTATTGTGGCGTCTACTGAGGTGGCCCAGAAAGACGTTGTGAAGCTGCTAGTAACTGGGGGAACTCATGCCCAGAAAGCGGTTGGAATATGGCTTTTCGGCTCAGCCGCATGGGTGTTTACTATGGTGGTACTTGGGGGTGTTACTAGACTGACACGATCTGGTCTTTCAATGACTGATTGGAAATTCACTGGTAGTCTCCCTCCCTTGTCAGATGAGGAATGGCAGCAAGAGTTTGAGAAATATAAGCAATCGCCTGAATACGAGCGAGTTAACAAGGGAATGAAGATTGAGGATTTCAAATTTATATATTGGATGGAGTATGCACATCGAATGTGGGGAAGGGCATTGGGGGTTATGTTTGCTTTGCCCTTCTCATATTTTCTCCGTAAGGGGTACATAACCTTACGATTGGGACTCAGACTCTCTACTCTGTTTGCCTTTGGGGCTGGCCAGGGTTTAATTGGGTGGTGGATGGTTAAAAGTGGTTTAGAGGAACCAGCATCTGAATATTCTCAGCCAAGGGTCAGCCCTTATCGCCTTGCCGCTCATCTTACTTCAGCATTTGCTATTTACTGTGGCCTCTTCTGGACTGCTTTGTCTGTTGTTATGCCTGAACCACCAGCTGAATCACTAGCATGGGTTCATGGGGCGGCTAAAGTGAAGAGACTTGCCCTGCCTATAGGCTTACTTGTTGGTCTGACAGCTATTTCAGGTGCATTTGTTGCTGGAAACGATGCTGGCCATGCATTTAATACTTTTCCAATGATGGGCGATACATGGATACCAGATGATATTTTTGAAATGAAACCTCCCATTCGGAACTTCTTTGAGAATACATCAACTGTACAGCTTGATCATCGCATCCTTGCAACAGCAACTCTGATTTCAGTAGGTGTTTTATGGTGGTCAACCAGAAAGCTGGACATACATCCTGCCGTCCGATCTCTGATCGGAAGCACTGTTGGGATGGCTGCTCTTCAGGTTACATTAGGAGTTTCAACGCTTCTTTCATACGTTCCCGTTTCACTGGGCACTGCACATCAGGCTGGAGCTTTAACGCTTATGACACTTATGTTACTGTTGAATCACACTGTTCGAAGGCCCTCACAGTGCCTTCTCAAGTCTCTGCCTCAAGTTGATAATAGGCCCTTGCTGTATTTTAGTTGTGGGCTGCTTGGCCAAATTTTTGTTGGTGGAAAAGTAGAAAACATATGTTGGCTTCTGCTCTGTGCATGCAAACTGTTAGACGAGTTGTCAGAGACATGTAAGATGGATTCTCTGAATGAAAGGCCAGTTCAGGAGATCGAAAACGAGAATCCTCATATCCCTGAAATATCTGCTCAGAAGTCAGAATCTACCATGAAAGCTGAACAAGGATCATGTTCCGGAGAATTCTATTGCACGCATCAGAAAACACTAAGGAGTATTGTCTACGACAGTTTACAAGTCGTGATTTTTTCAAATCGACTCAACTTGCTTTTGCCTCTTGGGCCTTTGGCAATTATTGTGGAGAGATTGACTAATCATCACGGTTGGGTATTCACTCTGAGTTTGTTGGGTATAATGCCCTTGGCTGAGCGGCTTGGTTTTGCTACAGAGCAGCTGGCATTTTACTCCGGAGACACTGTTGGGGGTCTTCTAAATGCCACTTTAGGAAATGCAACAGAACTGATCATCTCAATATATGCATTGAAAAGAGGAATGACACGAGTTGTCCAACTCTCTTTGTTGGGGTCAATTTTGTCTAACATGTTGTTGGTGCTTGGATGTGCATTTTTTTGTGGTGGGATTGTTTTTAATAAGAAGGAGCAGGCTACTGCTACAGTGAATGCCGGATTGTTATTGATGGCAGTCATGGGCCTACTTTTTCCTGCTGTTCTTCACTACACACGCACCGAGGTCCATTTTGAGAGCTCAGAGTTGGCCCTTTCGAGATTCAGCAGCTGCATTATGCTTGCGGCTTATGCTGCATACCTATTTTTTCAATTAAATAGTCAAAGAAGTCTATATCTCACTTTGAATGAGGAGGAGGGGAATCATGGAAACTGCACAGAAGATGATGAATCTCCTGATATCTCTAAATGGGAATCAGTAATCTGGCTTTCAATTATGACTGCTTTGATATCAATTCTTTCAGAATATTTAGTTGGTGCTATAGAGGGAGCATCAACTTCATGGAAAATGCCAGTGTCTTTTATCAGTGTAATATTGCTTCCCATAGTGGGAAATGCTGCAGAGCATGCCAGTGCTATCATGTTTGCCATGAAAGATAAGCTTGATATTTCCTTGGGCATAGCAATAGGTTCATCCACACAGATATCTATGTTTGTGATACCAGTTTGCGTGATTATTGGGTGGATAATGGGGCATCCAATGGATTTAAACTTTCAACTTTTTGAGACGGCAACACTATTTCTAACTGTTATTGTTGTAGTCCTCTTGTTACAGGAAGGGACTTCTAATTACTTCAAGGGACTTGTGCTTATTCTATGTTATCTGATAGTAGCAGCTAGTTTTTTTGTACATTTAGATCCTTCTTACTAG 2790 0.4337 MPLRADYLENEIKMFRSRVAWSLLRRSRDVIGTYKLRGTRPNTSFSAEDSSRFFYPSIARQYLHFFGSQTKGHNVPYMRSFCIVASTEVAQKDVVKLLVTGGTHAQKAVGIWLFGSAAWVFTMVVLGGVTRLTRSGLSMTDWKFTGSLPPLSDEEWQQEFEKYKQSPEYERVNKGMKIEDFKFIYWMEYAHRMWGRALGVMFALPFSYFLRKGYITLRLGLRLSTLFAFGAGQGLIGWWMVKSGLEEPASEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAESLAWVHGAAKVKRLALPIGLLVGLTAISGAFVAGNDAGHAFNTFPMMGDTWIPDDIFEMKPPIRNFFENTSTVQLDHRILATATLISVGVLWWSTRKLDIHPAVRSLIGSTVGMAALQVTLGVSTLLSYVPVSLGTAHQAGALTLMTLMLLLNHTVRRPSQCLLKSLPQVDNRPLLYFSCGLLGQIFVGGKVENICWLLLCACKLLDELSETCKMDSLNERPVQEIENENPHIPEISAQKSESTMKAEQGSCSGEFYCTHQKTLRSIVYDSLQVVIFSNRLNLLLPLGPLAIIVERLTNHHGWVFTLSLLGIMPLAERLGFATEQLAFYSGDTVGGLLNATLGNATELIISIYALKRGMTRVVQLSLLGSILSNMLLVLGCAFFCGGIVFNKKEQATATVNAGLLLMAVMGLLFPAVLHYTRTEVHFESSELALSRFSSCIMLAAYAAYLFFQLNSQRSLYLTLNEEEGNHGNCTEDDESPDISKWESVIWLSIMTALISILSEYLVGAIEGASTSWKMPVSFISVILLPIVGNAAEHASAIMFAMKDKLDISLGIAIGSSTQISMFVIPVCVIIGWIMGHPMDLNFQLFETATLFLTVIVVVLLLQEGTSNYFKGLVLILCYLIVAASFFVHLDPSY 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1282 929 Pfam Sodium/calcium exchanger protein 780 919 IPR004837 GO:0016020|GO:0055085
Lele01g1282 929 Pfam Sodium/calcium exchanger protein 594 745 IPR004837 GO:0016020|GO:0055085
Lele01g1282 929 FunFam Vacuolar cation/proton exchanger 767 923 - -
Lele01g1282 929 Gene3D - 621 757 IPR044880 -
Lele01g1282 929 Gene3D - 765 923 IPR044880 -
Lele01g1282 929 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 88 461 IPR023754 GO:0006784|GO:0016020|GO:0016653
Lele01g1282 929 TIGRFAM cax: calcium/proton exchanger 577 922 IPR004798 GO:0006816|GO:0015369
Lele01g1282 929 Hamap Heme A synthase [ctaA]. 106 450 IPR023754 GO:0006784|GO:0016020|GO:0016653
Lele01g1282 929 Pfam Cytochrome oxidase assembly protein 111 440 IPR003780 GO:0006784|GO:0016020|GO:0016653
Lele01g1282 929 FunFam Vacuolar cation/proton exchanger 623 758 - -
Lele01g1282 929 TIGRFAM caca2: calcium/proton exchanger 561 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1282 Lele-ChrLele01 7799083 7806646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1282 494 927 Antiporters AT1G55730 68.493 0.0 583