Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1257 ATGAAGAAAAACCCAGAACGCCATTTGGTTCTTTCAAGACAAAGTAGTAATCAGAATGCAGGCAATGATACAAACAAGCACAATCAAAGGACTAGTTCTTCTCTAAAGTCTTTCAAATCTTTTGTCAAGAAATTCGCAGTCGTTTTTGCAATCTTTGGCTCTGACGAGAGAAAATCAGCTTCAGAAGTTGCAGGAACTGATATCAGAAGGAATAGAAGTAGAGTCAGATTGGTATCATCATTTTTAAATGATGTATCATCTGAGAGTAACAAGAAGAATTCATCATGGAAGTTTTCTAATTCCTACGCATCTTCAAGCGCCACAAGTGGACAACTTGGAATGGGGAACTTCTCGTTTGAAGATCTTTACAAGGCAACAGGAAAATACTCTGCAAATCAAATGATAGGGCAAGGTGGGTTTGGAACTGTGTATAAAGGGAAGCTCAATGATGGATCTCTGGTTGCCATAAAGCGCTCCAAGAAGGTTTTGAATGTTTATTTCTACTTGATTTTGAGATCGGAAATGGCGGGGAAAGTGGAGGTGAATGGCAGCGGCGCTTCTTCTGCTTCTGCTGTTTCTGCCAAACTTCCGGCGGTGGCCAACCCATTGGCTGAAAAGCCTGATGAGATTGCGTCCGACATCAATTACCACGCGCAGTATAGCACTCATTTCACCCCTTTCAAGTTTGAGCTGGAGCAGGCTTACTTCGCCACTGCTGAGAGTGTTCGCGATCGTCTCATTCGACAATGGAATGAAACGTTCCTCCATTTTCATAAAGTTGATCCCAAGCAAACATATTACTTATCAATGGAGTATCTTCAAGGTCGAGCTTTGACTAACGCAGTTGGGAACCTGAATATACAAGAAGCATATGCTGATGCTTTGCGCAAATTTGGACTCAAACTTGAAGAAATAACAGAGCAGGAGAAAGATGCAGCTTTAGGAAATGGTGGTCTGGGCAGGCTTGCTTCTTGCTTTCTGGATTCCATGGCAACACTAAATTTGCCTGCTTGGGGTTATGGTCTGAGGTATAGATTTGGGCTATTTAAGCAGATAATCACCAGGGAAGGCCAGGAGGAACTTGCAGAGGACTGGCTTGAGAAGTTTAGCCCCTGGGAAGTTGCAAGGCATGACATTTCGTACCCTGTCAGATTCTTTGGCCACGTTCAGGTTAATCTTAATGGAAGCCGAAAATGGGTTGGAGGAGAGGTTGTGCAAGCGTTGGCATTTGATGTGCCAATTCCAGGATATCAAACCAAGAATACCATCAGTCTTCGCCTTTGGGAAGCAAAAGCTTGTGCTGAGGATTTCAATTTGTTTTTATTTAATGATGGACAACATGAATCTGCTTCTGTTCTTCATTCACGAGCTCAACAGATTTGTGCGGTCTTGTATCCTGGGGATGCTACAGAAGATGGGAAACTTCTTAGGCTGAAGCAGCAATTCTTTCTCTGCAGTGCATCACTCCAGGACATAATTGTTCGGTTTAAAGAGAGGAGACAAGGAAAGGAATCTTGGACATGGTCTGAGTTTCCTAGCAAGGTTGCTGTGCAACTTAATGATACTCATCCTACCCTTGCAATTCCAGAGCTAATGCGACTACTTATGGATGATGAAGGGCTTGGATGGGATGAAGCATGGGATGTGACAACGAGGACAATTGGTTACACTAACCACACTGTCCTCCCTGAGGCACTGGAAAAATGGTCTCAACCTGTAATGTGGAAACTACTTCCTCGCCATATGGAAATCATAGAAGAAATAGACAAGAGGTTCACTGCATTTATAAGTGCAACAAGGTTGGACCTTGAGAGTAAGCTTCCTGCCATGCGCATTATGGACAATAATCCCCAGAAGCCAGTAGTCCGGATGGCAAATTTATGTGTGGTGTCCTCACATGCTGTGAATGGTGTTGCCCAGTTGCACAGTGACATTCTAAAATCAGAATTATTTGCGGATTATGTTTCAATATGGCCAAAGAAGTTCCAAAATAAAACCAATGGCATCACACCTCGAAGATGGCTCCGTTTTTGTAGTCCTGAGCTCAGTAAGATAATCACCAAGTGGTTAAAAACTGATCAATGGGTAACCAATCTTGATTTACTGACAGGTCTTCGACAGTTTGCAGACAACGAAGAACTGCAAGCTGAATGGCTGTCTGCAAAGAGAGCTAATAAGCTACGCTTGGCACAGTACGTTCTACAGGTGACAGGGGTGAGCATTGATCCGGATAGTCTGTTTGACATACAAGTCAAGCGCATCCATGAATACAAGAGACAGCTACTGAACATTCTGGGTGCGATTTATAGATACAAGAAGTTGAAGGAGATGAGCCCTGAAGAAAGGGAAAAAACAACTCCACGCACTGTGATGATTGGAGGGAAAGCTTTTGCTACATATACAAATGCTAAAAGAATAGTAAGGCTGGTTAATGATGTTGGCGCTGTAGTCAACACTGATCCTGAGGTCAATAACTACTTGAAGGTTGTGTTCGTCCCAAATTACAATGTGTCTGTGGCAGAGGTGCTGATTCCAGGAAGTGAGCTGTCCCAGCACATCAGCACAGCAGGCATGGAAGCAAGTGGCACAAGCAACATGAAATTTGCATTAAATGGGTGCCTCATAATAGGTACTTTAGATGGAGCTAATGTTGAGATCAGGGAGGAAATTGGTGAGGAAAACTTTTTCCTCTTTGGCGCAACAGCAGAAGATGTCCCTCGTCTCCGAAAGGAAAGAGAGAATGGACTGTTCAAACCAGACCCTCGGTTTGAAGAGGCAAAGAAGTTCATTAGGAGTGGGGTATTTGGAAGCTATGACTATAACCCACTGCTTGAGTCGTTGGAAGGAAATTCTGGTTATGGTCGTGGTGACTATTTTCTTGTAGGCCATGACTTCCCCAGCTACATGGATGCTCAGGCAAGGGTAGATGCTGCTTATAGGGATAGGAAAAGATGGCTAAAGATGTCCATTTTAAGCACAGCTGGGAGTGGAAAATTCAGCAGCGACAGGACCATTGCTCAGTATGCCAAGGAAATTTGGAACATAGAAGAGTGCCTCGTTCCTTAA 3066 0.4364 MKKNPERHLVLSRQSSNQNAGNDTNKHNQRTSSSLKSFKSFVKKFAVVFAIFGSDERKSASEVAGTDIRRNRSRVRLVSSFLNDVSSESNKKNSSWKFSNSYASSSATSGQLGMGNFSFEDLYKATGKYSANQMIGQGGFGTVYKGKLNDGSLVAIKRSKKVLNVYFYLILRSEMAGKVEVNGSGASSASAVSAKLPAVANPLAEKPDEIASDINYHAQYSTHFTPFKFELEQAYFATAESVRDRLIRQWNETFLHFHKVDPKQTYYLSMEYLQGRALTNAVGNLNIQEAYADALRKFGLKLEEITEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRFGLFKQIITREGQEELAEDWLEKFSPWEVARHDISYPVRFFGHVQVNLNGSRKWVGGEVVQALAFDVPIPGYQTKNTISLRLWEAKACAEDFNLFLFNDGQHESASVLHSRAQQICAVLYPGDATEDGKLLRLKQQFFLCSASLQDIIVRFKERRQGKESWTWSEFPSKVAVQLNDTHPTLAIPELMRLLMDDEGLGWDEAWDVTTRTIGYTNHTVLPEALEKWSQPVMWKLLPRHMEIIEEIDKRFTAFISATRLDLESKLPAMRIMDNNPQKPVVRMANLCVVSSHAVNGVAQLHSDILKSELFADYVSIWPKKFQNKTNGITPRRWLRFCSPELSKIITKWLKTDQWVTNLDLLTGLRQFADNEELQAEWLSAKRANKLRLAQYVLQVTGVSIDPDSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPEEREKTTPRTVMIGGKAFATYTNAKRIVRLVNDVGAVVNTDPEVNNYLKVVFVPNYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEIGEENFFLFGATAEDVPRLRKERENGLFKPDPRFEEAKKFIRSGVFGSYDYNPLLESLEGNSGYGRGDYFLVGHDFPSYMDAQARVDAAYRDRKRWLKMSILSTAGSGKFSSDRTIAQYAKEIWNIEECLVP 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1257 1021 ProSitePatterns Protein kinases ATP-binding region signature. 135 157 IPR017441 GO:0005524
Lele01g1257 1021 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 207 1018 - -
Lele01g1257 1021 FunFam Alpha-glucan phosphorylase 2, cytosolic 195 673 - -
Lele01g1257 1021 PANTHER GLYCOGEN PHOSPHORYLASE 190 1018 IPR000811 GO:0005975|GO:0008184
Lele01g1257 1021 MobiDBLite consensus disorder prediction 1 33 - -
Lele01g1257 1021 Gene3D Phosphorylase Kinase; domain 1 88 175 - -
Lele01g1257 1021 SUPERFAMILY Protein kinase-like (PK-like) 93 174 IPR011009 -
Lele01g1257 1021 FunFam Alpha-1,4 glucan phosphorylase 674 1000 - -
Lele01g1257 1021 Gene3D Glycogen Phosphorylase B; 237 1016 - -
Lele01g1257 1021 CDD GT35_Glycogen_Phosphorylase 213 1015 - -
Lele01g1257 1021 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 859 871 IPR035090 -
Lele01g1257 1021 Gene3D Glycogen Phosphorylase B; 669 1000 - -
Lele01g1257 1021 TIGRFAM P_ylase: glycogen/starch/alpha-glucan phosphorylases 208 1015 IPR011833 GO:0004645|GO:0005975|GO:0030170
Lele01g1257 1021 MobiDBLite consensus disorder prediction 10 33 - -
Lele01g1257 1021 Pfam Carbohydrate phosphorylase 295 1015 IPR000811 GO:0005975|GO:0008184
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1257 Lele-ChrLele01 7623292 7635616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1257 184 1021 Glycosyltransferase AT3G46970 82.220 0.0 1469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1257 01 7623292 7635616 Lele01g1257 01 7623292 7635616 ECH
Lele01g1257 01 7623292 7635616 Lele03g1269 03 7590734 7602464 hybridization
Lele01g1257 01 7623292 7635616 Lele04g1513 04 20201342 20208353 hybridization