Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1241 ATGGCAACCTTTGTTGGTTTCTTGGCTAAGTTCGTTTCTCTTTTCATCCTCTTTGTTCACCTTGGCTGCTTCATTTTCTCCACCGCCGGCGGTGAAGGGGGAGAGCAAGGTGCCCGGAAGTCTTCGTCAAAGAAACGCAAGGTTTCCCCTGTTTTGCAGTCGCAGCATTCTTCTCCTTCCCATCCCAAGTTCAAAACCCGTAAAGCTATTTGTTCTTCTTGGACTTTCATCAAGCACCTTTTCTCCCACAAATGTTGCAAAACCAGTGACGTTATTCAGGGATCGCCGCAATCCTCGGCCTCCACCGCTATTTCCGCTGGTTCCGCCGTCTTCGCCGTACTGCCTTCTTTGACATCAACTAGATCCTCTCAGCAGTCGTTGGTCTCTCTGGCGCAAGCCGAATCGCATGCGCTGGATCCTCCCGGGAAAAAACCATGCGCGTCATGCCCTGAATCCGATATCGTCGCCGACAACAGCCAATTCTTCCCCCTCCGCAATGACATCTTCCCCTGCACCGCCTGTGGCGAGGTTTTCCAGAAACCACAAGTTCTCGAACAGCATCAATCGCTGAAACACGCCATGTCGGAGCTGGTGGAGACCGACGCTGGTCATAACATAGTGAGGATAATATTCAAGTCGGGTTGGACCAACACGCAGAAATGCCCCAAAATAAGTCGGATCCTGAAGATCCATAACAGCCCGAAGATCCTCTCCAAGTTCGAAGAATACAGAGAGACGGTGAAGGCCAAGGCCGCCCGAAACGGCGCCGTAAAGAAGCGCGACGAAAGATGCGTAGCCGACGGCAACGAGCTCATGAGATTCCACTGTTCCACTTTCCTCTGCGACTTAGGACTCAACGGGAATTCCGGCATTTGTGGCCAACAATATTGTAATATCTGCGGGATCATCAAATCGGGGTTCTCACCCAAGTTGGACGGAATCTCCACGCTATCGACGAGCTGGAGGGCGCACGTGGCCATCCCGGAGGAGGTGGAGGAGGAGTTCAAGTTCATGAATGTGAAGCGGGCCATGCTGATATGCCGGGTCGTAGCGGGTCGGATCGGGACAGACTCGGACGAAGTCGACAAGGAGAACGGGGGTTTTGATTCGGTGATGGCACGAGGAGGAAGCGGAGTTTATACCCGGCTGGACGAAGAGGAGCTATTGGTGTTCAATCCCAGAGCTGTGCTTCCATGCTTTGTCATTGTGTATAGCGTGTGA 1221 0.5291 MATFVGFLAKFVSLFILFVHLGCFIFSTAGGEGGEQGARKSSSKKRKVSPVLQSQHSSPSHPKFKTRKAICSSWTFIKHLFSHKCCKTSDVIQGSPQSSASTAISAGSAVFAVLPSLTSTRSSQQSLVSLAQAESHALDPPGKKPCASCPESDIVADNSQFFPLRNDIFPCTACGEVFQKPQVLEQHQSLKHAMSELVETDAGHNIVRIIFKSGWTNTQKCPKISRILKIHNSPKILSKFEEYRETVKAKAARNGAVKKRDERCVADGNELMRFHCSTFLCDLGLNGNSGICGQQYCNICGIIKSGFSPKLDGISTLSTSWRAHVAIPEEVEEEFKFMNVKRAMLICRVVAGRIGTDSDEVDKENGGFDSVMARGGSGVYTRLDEEELLVFNPRAVLPCFVIVYSV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1241 406 Gene3D - 192 405 - -
Lele01g1241 406 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 72 404 - -
Lele01g1241 406 ProSitePatterns Zinc finger C2H2 type domain signature. 171 192 IPR013087 -
Lele01g1241 406 MobiDBLite consensus disorder prediction 31 64 - -
Lele01g1241 406 ProSiteProfiles Zinc finger C2H2 type domain profile. 169 197 IPR013087 -
Lele01g1241 406 SUPERFAMILY ADP-ribosylation 194 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1241 Lele-ChrLele01 7516430 7517650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1241 74 406 C2H2 Transcription Factor Family AT2G29660 53.936 1.90e-107 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele01g1241 None None None