Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1238 ATGGAAGGGATGATGCCTCCGAGGAACCCTGCCGCCATTTCCATGCAGCAATCATCTTCTTCAACAGGGCCTCCTTTGAGCGCCATAGACAGGTTCTTGTGGGGCCAACTCAGTCACTTGTCTGCTCTGTGGCCTAACAGTGACGTCGACATCGAAGCCAGTTTCATCGATGAGTTTATAGCAAACAATGAAGTTCATCAGATGATGATCCCTACAGTTCTGGAGAAGAAAGCTTCTGGTAATTCTTCAACGGTGGTAGGGAAGAGAATCCATAGGAAAGGATCTTCTTCTTCTGCGTCGTTGATCAAAGGACAGTGGACTGATGAAGAAGACAAGAAACTGGTGAAGCTGGTGAATGAATATGGAGTGAGGAAATGGGCACTGATAGCTGAGAATTTGGAGGGAAGAGCTGGGAAGCAATGCAGGGAGAGATGGCATAATCATCTACGTCCTGATATTAAGAAGGATAGTTGGAGTGAAGAAGAAGAGAAAATATTGGTAGAAACACATGCAAAGGTAGGGAATAGGTGGGCAGAGATAGCCAAGAGAATTCCAGGCAGAACAGAGAATGCAATCAAGAACCATTGGAATGCCACCAAAAGGAGACAGAACTCCAAGAGAAACCACAAATCTTCAAACAAAACCTCCAACAACAACAACAACAATGGAAGAAAGCCTCCTTCTTCCATTCTCCAAGATTACATCAAAAGGAAGAATCTCTCCAATAATAACAATGGAAATGACCACCTTCTTCAGGGCCCACCTCATGATAAAAACCAATTGATCAACCTTGTGATTTCTGATCATCATCATCAAGATCCCTCTCACGATGAACCTGTGATGGCAGAAGCATTTGATGATGAGCTTCTCTTCATGCAACAGTTCTTCCCAGAGAATTATCAGAACCAGCAGGTTCAGTTTCAGTCCACTTTGGAATTTTGTCGAACAGATAATGGGCATGAGGGTCATCTTCCTCAACAGAGTGTTACTGCTACTAGTGCTGCTCCCATGAAACAACAGCACCATCATCATTCTGATATGTTTCTGGCTCAGTTATTGAATGGGGTTGGTTATAATTCAACCATTTTCTGCTGTGATTATGGGAAAGATCAAAATTTTAACATGGGTTTTCAGGTAGGGGATGATCATCAGCAAGCTTGGTATGAAGAAGCAAAGAGAGAGATGGATTTGATGGAATTGGTCTCCTCTCAGCTTTCAAGTAGCCCCAGCAACAGGATCTTCTAG 1245 0.4345 MEGMMPPRNPAAISMQQSSSSTGPPLSAIDRFLWGQLSHLSALWPNSDVDIEASFIDEFIANNEVHQMMIPTVLEKKASGNSSTVVGKRIHRKGSSSSASLIKGQWTDEEDKKLVKLVNEYGVRKWALIAENLEGRAGKQCRERWHNHLRPDIKKDSWSEEEEKILVETHAKVGNRWAEIAKRIPGRTENAIKNHWNATKRRQNSKRNHKSSNKTSNNNNNNGRKPPSSILQDYIKRKNLSNNNNGNDHLLQGPPHDKNQLINLVISDHHHQDPSHDEPVMAEAFDDELLFMQQFFPENYQNQQVQFQSTLEFCRTDNGHEGHLPQQSVTATSAAPMKQQHHHHSDMFLAQLLNGVGYNSTIFCCDYGKDQNFNMGFQVGDDHQQAWYEEAKREMDLMELVSSQLSSSPSNRIF 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1238 414 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 154 204 IPR017930 -
Lele01g1238 414 SUPERFAMILY Homeodomain-like 100 196 IPR009057 -
Lele01g1238 414 CDD SANT 157 200 IPR001005 -
Lele01g1238 414 Gene3D - 156 228 - -
Lele01g1238 414 Pfam Myb-like DNA-binding domain 106 164 - -
Lele01g1238 414 ProSiteProfiles Myb-like domain profile. 150 200 IPR001005 -
Lele01g1238 414 MobiDBLite consensus disorder prediction 1 24 - -
Lele01g1238 414 ProSiteProfiles Myb-like domain profile. 98 149 IPR001005 -
Lele01g1238 414 CDD SANT 106 149 IPR001005 -
Lele01g1238 414 PANTHER MYB PROTEIN-RELATED 94 222 - -
Lele01g1238 414 MobiDBLite consensus disorder prediction 186 229 - -
Lele01g1238 414 FunFam Transcriptional activator Myb isoform A 102 155 - -
Lele01g1238 414 Gene3D - 102 154 - -
Lele01g1238 414 SMART sant 154 202 IPR001005 -
Lele01g1238 414 SMART sant 102 151 IPR001005 -
Lele01g1238 414 MobiDBLite consensus disorder prediction 210 229 - -
Lele01g1238 414 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 98 153 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1238 Lele-ChrLele01 7504602 7506962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1238 23 408 MYB Transcription Factor Family AT5G58850 40.187 4.41e-79 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele01g1238 Myb_DNA-bind_6 2.3e-19 CL0123