Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1236 ATGCCGGCCATTGCCGGGCGTAAGCTCGCCAAGGAAGCTCTCTCTGAGACAATGGCCATCGTGCCGGAGAAGGCGGCTTCCGATGCCCGATCTGAAGCCAATTCCACTCCTCGTAAGAGGAAATTGAGATCCGATGGGCCGCTGATTATGAACAGTCCAAACTCTTCGCCGAACAAATGGAAGTCGCCTCGCCGATGTAGCAGTGAGAGCCCAAGTCGCGCTGTCACCGCGAATGAGATGGTTACTAATGAAGGTGACATCAAATCGCATAAATCGCCGTCGAAGACAATGCAGGATGGTTTTACTGATAAACCGAAATGGAATCCCAAAGATGGTGAACAAGTAAGTACAGTGAAGGAGGCATTGCACGTGTCTACGGCACCATCTACAATTGTCTGCCGTGAAGACGAGCAGAATATGGTTTTTGAGTTCTGTAAGTCATGCATTGAACATAAGAAGGCTGGGAGTATGTACATATGTGGGTGTCCTGGTACTGGAAAGTCGCTATCCATGGAGAAAGTAAAAGAGCTTTTAGTCGATTGGGCTAGACAGGCTGGCTTCCTTCTTCCCGATGTCTTGTCTGTGAACTGTACATCACTTGCTAATACATCTGACATTTTCAGCAAGATACTTGGATTAAACCAACCACGGGGAAAAAAGACTTCAGCCTCTCCCTTACAACAACTTCAGAGCTTGTACACTCAAAAGTCATCTAGCCAGAACATGATATTGATAGTGCTTGACGAATTAGATTATCTAATCACCAAAGATAGGGCTGTGCTTCACGATCTCTTCATGCTCACCACTTTCCCATTTTCTAGATGTATATTAATAGGGATATCAAATGCAATTGACCTTGCTGATCGTTTTCTTCCAAGGTTGAAATCATTGAACTGCAAGCCTATAATTGTAACATTTCGAGCATACTCTAAAGACCAGATCCTCAGCATTCTGAAAGAAAGGCTAAGGGAACTTCCTTACACTGTATTCCAACATCAAGCACTAGAGCTCTGTGCTAGGAAAGTTGGTGCCGCTTCTGGAGACATGCGAAAAGCTCTTTGTATTTGCAGGAGTGCAATTGAGATGCTGGAGGCAGCAATTAGAGAGTCTGTTGGCCTTTCAGAAATTTCATTGGAAGAGAAGACTTCCCCTCAACAAAACATAGCTTCTGATCTCGATCATGTAAAAAAGCAAGAATTTGATGTTGTAAGGATTGATCATATGGCTCTTGCCTTGTCCAAGACTTATAGATCTCCTGTGGTGGATACAATACAATCTCTACCACATCATCAACAGATTATCCTTTGCTCATCGATGAAACATTTCCGTGGAGCAAAGAAAGATACAATCCTTGGCGAGTTGTACAAATCGTACGCGGGCATATGCAAATCAACACTGATTCCTCCTGCTGGAATTTTGGAATTTTCAAATATGTGCAGGGTATTGAGTGATCAGGTATCCTTGGCGATGTTTACTGTAAATGTTTCTTTAGACGGGCTTATTAGACTAGGACCATCACGGGAGGACAAATTGAAGAGGGTGACGCTAAAAATAGATGAAGCTGATATTACCTTTGCATTGCAGGGAATCCGTTTCTTTAGAAACTTTGACATCCAGCAATGGTGCAGAAAACGTGTTTGGTTTAGCGGAACAGCGATCAACCACAGGGTTTAA 1674 0.4367 MPAIAGRKLAKEALSETMAIVPEKAASDARSEANSTPRKRKLRSDGPLIMNSPNSSPNKWKSPRRCSSESPSRAVTANEMVTNEGDIKSHKSPSKTMQDGFTDKPKWNPKDGEQVSTVKEALHVSTAPSTIVCREDEQNMVFEFCKSCIEHKKAGSMYICGCPGTGKSLSMEKVKELLVDWARQAGFLLPDVLSVNCTSLANTSDIFSKILGLNQPRGKKTSASPLQQLQSLYTQKSSSQNMILIVLDELDYLITKDRAVLHDLFMLTTFPFSRCILIGISNAIDLADRFLPRLKSLNCKPIIVTFRAYSKDQILSILKERLRELPYTVFQHQALELCARKVGAASGDMRKALCICRSAIEMLEAAIRESVGLSEISLEEKTSPQQNIASDLDHVKKQEFDVVRIDHMALALSKTYRSPVVDTIQSLPHHQQIILCSSMKHFRGAKKDTILGELYKSYAGICKSTLIPPAGILEFSNMCRVLSDQVSLAMFTVNVSLDGLIRLGPSREDKLKRVTLKIDEADITFALQGIRFFRNFDIQQWCRKRVWFSGTAINHRV 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1236 557 SUPERFAMILY "Winged helix" DNA-binding domain 420 535 IPR036390 -
Lele01g1236 557 Pfam AAA lid domain 330 365 IPR041083 -
Lele01g1236 557 MobiDBLite consensus disorder prediction 21 112 - -
Lele01g1236 557 Gene3D - 111 298 IPR027417 -
Lele01g1236 557 PIRSF Cdc6 5 540 IPR016314 GO:0006270|GO:0051301
Lele01g1236 557 Gene3D - 299 423 - -
Lele01g1236 557 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 31 535 - -
Lele01g1236 557 CDD AAA 137 298 - -
Lele01g1236 557 FunFam Cell division control protein 298 424 - -
Lele01g1236 557 Pfam CDC6, C terminal winged helix domain 435 526 IPR015163 -
Lele01g1236 557 Gene3D - 424 520 IPR036388 -
Lele01g1236 557 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 372 IPR027417 -
Lele01g1236 557 MobiDBLite consensus disorder prediction 48 83 - -
Lele01g1236 557 FunFam Cell division control protein 112 297 - -
Lele01g1236 557 Pfam AAA domain 152 268 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1236 Lele-ChrLele01 7479251 7484837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1236 1 535 Core DNA Replication Machinery Family AT2G29680 56.831 0.0 579