Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1225 ATGGCGAAAACGGCGTCGTTGTTGCTCTGGACACTGTTCCTCTTCGGCACTCTCGCCCTCATCCAGGCGAAGAAGTCGAAGGAGGATTTGAAAGAAGTGACAAACAAGGTTTATTTCGACATCGAGATTGATGGAAAGCCTGCTGGGGAGAAAGGAACTGGAAAAAGTGGAAAGCCTCTCCATTACAAGGGCAGCACATTCCACAGGATTATTCCTAGCTTTATGATTCAAGGAGGTGATTTTACCCACGGCAATGGAATGGGGGGTGAGTCAATCTATGGAGAGAAGTTTGCTGATGAGAACTTCAAGCTGAAGCATACTGGACCAGGAATTTTATCAATGGCAAATGCCGGTCCCGATACCAATGGTTCACAATTTTTCATCACTACTGTGACAACTAGCTGGTTGGATGGAAGGCACGTTGTGTTCGGAAAAGTGATTTCTGGAATGGATGTGGTGTACAAGATCGAGGCTGAAGGAAGGCAAAGTGGCTCTCCCAAGAGCAAGATCTTCATTGCTGATAGCGGTGAATTGTAA 537 0.4637 MAKTASLLLWTLFLFGTLALIQAKKSKEDLKEVTNKVYFDIEIDGKPAGEKGTGKSGKPLHYKGSTFHRIIPSFMIQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGILSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVISGMDVVYKIEAEGRQSGSPKSKIFIADSGEL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1225 178 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 61 174 IPR002130 GO:0000413|GO:0003755
Lele01g1225 178 Gene3D - 48 178 IPR029000 -
Lele01g1225 178 FunFam Peptidyl-prolyl cis-trans isomerase CYP19-2 47 178 - -
Lele01g1225 178 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 125 137 IPR002130 GO:0000413|GO:0003755
Lele01g1225 178 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 138 153 IPR002130 GO:0000413|GO:0003755
Lele01g1225 178 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 67 79 IPR002130 GO:0000413|GO:0003755
Lele01g1225 178 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 110 125 IPR002130 GO:0000413|GO:0003755
Lele01g1225 178 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 49 178 - -
Lele01g1225 178 SUPERFAMILY Cyclophilin-like 33 178 IPR029000 -
Lele01g1225 178 PIRSF Peptidylpro_ismrse 47 178 IPR024936 GO:0003755
Lele01g1225 178 PIRSF Peptidylpro_ismrse 22 51 IPR024936 GO:0003755
Lele01g1225 178 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 11 177 IPR002130 GO:0000413|GO:0003755
Lele01g1225 178 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 62 79 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1225 Lele-ChrLele01 7409037 7411708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1225 61 157 U-box Gene Family AT5G67530 53.061 8.04e-26 101