Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1221 ATGACAAATCTACCCTCATCACATGTTACTATTCCTTTTTCCATCTTCATCTTCACCTCCACCTCCACCACCATCATCTTCCTTCTTTCTCTGCTGTTACCGACCGCCGTCAACAGCCTCGGCTCTGCATCAACCACTGCTGTCGTCTATGGAACCGGTACCTTCTGCGGCATTGTTGCTAGCGAGCCCACCCAGATGATCCTATGCTATCAAAACGGTCAGAGTATTCAAGTTCTTCCCAATGTCTCATTTCAAGCCATCTCCGGTGGCCGGAGCTTCTTCTGCGGTCTCTTCTCTGGTGGATTCACCCTCCTTTGCTGGGACACTACAGATTCATACTTTCCCTTTAAGCCTAGACGCTTGTATTACAACGCCACCGTCTCATTGACTGATCTAACAGTTGGAGATACTCAGGTTTGTGCCAGAGCGTTGAACAATGGTATTGTCAGATGCTGGAGAGGTAAAGACGGAAATGGACATGAGTTTCCTTTTCCTAATGAGGACCTTCATTTTCGTGGGGTCACATCTGGATGTGGGTTTTCTTGTGGCATTCTGAAGGGAAACAACAGTGTTCATTGTTGGGGTCAGAGAGAAAGTAATGGGGATGAGATTCAGAGACAGTTTAGGAATCTCTCAATGTCAAGCCTAGTTGCAGGAGAATCCCATGTTTGTGGTTTGACCATTAATGGAGTTTTGGTCTGTAAAGGAAGCAATAAAGCTGGGCAATTGAATGTTCCTCTCAGTTCACCTTCAGAATTCTCAAGCCTCGCATTAGGATTGAACTTCACTTGTGCTATTAGAAGCAAAAATGGTCTGGTAATGTGCTGGGGAAGAATCAACATGTCTGAGATTGAGAGTGACATGATTCAGAATGTTTCATTCGAGTCAATTGTTGCTGGTTCGGATTATGTTTGTGGGTTAATGACAGGGAATTTGTCTGTGATCTGCTGGGGACCAGGTTGGTCTAGAAGGCTTAATAATAACAACTCACATACAACAGATCTTCTTCTTCCTCTGGGAATGATAATCCCAGGTCCATGTGTTACGGATTCTTGTAGCTCTTGTGGTACATATCCAAACTCCGAGGTTCTCTGTCATGGGTCTGCCAGAATATGCTATTCTTGCCAAACAGAGAATCCACTCGCAGTGCCATTACCAATCCCACCCCCTCCATCATCACCATATTCACCAAATTCTTCAACCCCACAAAGAAACACAAGAACAAGAGAAAGGTTGATATTTCTGATTCTTGGATCAACTGGTGCTTTTGTTGGTCTCTGCTCAGTTCTTTTCTGCTTGTGGTTTGGAACATGTCGTTTATTATTATTGCAGAGAAAGTCTGACAATGTAGTTCAAGCCACAACCACTGAAGCCGATGTGGATATTACTTTTCCTGCTACTGCTTCAACCACAGGCACAACCATGAGATCATTCTCCAGCAAACTACAGAATTCACGGACATTAAGGAGCTACAGAAGAAGTGGATCATCCTCCATTGTAGTAGACAAGATGGAGACCTTCACGTTATCAGAACTCGCGACAGCCACAAACAACTTCTCGATTGAAAACAAAATAGGTTCCGGAAGCTTCGGCGCCGTGTACAGAGGCAAGCTAGAAGATGGACGTGAAGTAGCAATCAAAAGAGGAGAAACCTGCACGAGAAAGAAGAAATTCCAAGAAAAAGAAAGCGCATTCGATTCAGAAGTGGCTTTATTATCGAGGCTTAATCACAAACACCTGGTGGCCCTCATTGGATTCTGCGAGGAAAACGACGAGAAACTCCTAGTCTACGAATACATGACAAACGGATCACTCCACCACCACTTACACAACAATCTCAACACCGAAAAAACCAGCAGTTCCATAAATTCATGGCGAATGAGGATCAAAATCGCACTAGACGCAGCAAGAGGGATAGAGTATCTTCACAACTACGCAGTACCCTCGATAATTCACAGAGACATAAAGTCATCAAACATTCTGTTAGACTCAAATTGGAACGCGAGAGTCTCGGATTTCGGATTATCATTGATGGGCGATCAAGAACAGATATCAACGAAAGCTGTAGGAACAGTAGGGTACATAGATCCAGAGTACTACGTGATGAACGTGTTGACTACAAAAAGTGATGTTTATGGATTAGGGGTGGTTATGTTGGAGCTTTTGACAGGGAAAAGAGCGGTGTTTAGGGACGAAGAGGAAGGAGGGTCGAGTCCGGTGGGTGTGGTGGAATTTGCAGGACCGAGGATCGGAGGAGGAGAGCTATGGAGTGTGTTGGATTACAGAGTAGGAGAACCAGAGGTGAACGAAGTAGAAGCTTTGGAGATAATGGCGTATAGTGCAATGCATTGTGTGAATCTGGAGGCGAAAGAGAGACCAAGTGTGAGTGATATTGTGGCGAATCTGGAGGGAGCTTTGGCATTTGTTGAAGGAAGTCCTCGTAGTGTCTCCATTACAGCTTTCTCTTCCTCTGCTCCGTTCGAATGA 2487 0.4479 MTNLPSSHVTIPFSIFIFTSTSTTIIFLLSLLLPTAVNSLGSASTTAVVYGTGTFCGIVASEPTQMILCYQNGQSIQVLPNVSFQAISGGRSFFCGLFSGGFTLLCWDTTDSYFPFKPRRLYYNATVSLTDLTVGDTQVCARALNNGIVRCWRGKDGNGHEFPFPNEDLHFRGVTSGCGFSCGILKGNNSVHCWGQRESNGDEIQRQFRNLSMSSLVAGESHVCGLTINGVLVCKGSNKAGQLNVPLSSPSEFSSLALGLNFTCAIRSKNGLVMCWGRINMSEIESDMIQNVSFESIVAGSDYVCGLMTGNLSVICWGPGWSRRLNNNNSHTTDLLLPLGMIIPGPCVTDSCSSCGTYPNSEVLCHGSARICYSCQTENPLAVPLPIPPPPSSPYSPNSSTPQRNTRTRERLIFLILGSTGAFVGLCSVLFCLWFGTCRLLLLQRKSDNVVQATTTEADVDITFPATASTTGTTMRSFSSKLQNSRTLRSYRRSGSSSIVVDKMETFTLSELATATNNFSIENKIGSGSFGAVYRGKLEDGREVAIKRGETCTRKKKFQEKESAFDSEVALLSRLNHKHLVALIGFCEENDEKLLVYEYMTNGSLHHHLHNNLNTEKTSSSINSWRMRIKIALDAARGIEYLHNYAVPSIIHRDIKSSNILLDSNWNARVSDFGLSLMGDQEQISTKAVGTVGYIDPEYYVMNVLTTKSDVYGLGVVMLELLTGKRAVFRDEEEGGSSPVGVVEFAGPRIGGGELWSVLDYRVGEPEVNEVEALEIMAYSAMHCVNLEAKERPSVSDIVANLEGALAFVEGSPRSVSITAFSSSAPFE 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1221 828 SUPERFAMILY RCC1/BLIP-II 124 368 IPR009091 -
Lele01g1221 828 CDD STKc_IRAK 525 804 - -
Lele01g1221 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 650 662 IPR008271 GO:0004672|GO:0006468
Lele01g1221 828 SUPERFAMILY Protein kinase-like (PK-like) 493 802 IPR011009 -
Lele01g1221 828 MobiDBLite consensus disorder prediction 386 405 - -
Lele01g1221 828 FunFam receptor-like serine/threonine-protein kinase NCRK 494 599 - -
Lele01g1221 828 ProSiteProfiles Protein kinase domain profile. 519 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1221 828 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 210 812 IPR044815 GO:0004674
Lele01g1221 828 Gene3D Transferase(Phosphotransferase) domain 1 600 811 - -
Lele01g1221 828 Pfam Protein kinase domain 520 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1221 828 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Lele01g1221 828 SMART serkin_6 519 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1221 828 Gene3D - 213 384 IPR009091 -
Lele01g1221 828 Gene3D - 30 212 IPR009091 -
Lele01g1221 828 Gene3D Phosphorylase Kinase; domain 1 479 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1221 Lele-ChrLele01 7383414 7385900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1221 14 817 Receptor kinase-like Gene Family AT3G55950 52.237 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lele01g1221 Pkinase 1.9e-46 CL0016