Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1209 ATGACTTCTTGGGTGAGAGGGAATTGTATCGGTAAGGGTGCGTTTGGCACCGTCAGTGTTGGTATTGACAGATGGGACGGTCGGGTTTTTGCGGTGAAATCGGTGGATCTCAAGATGGGTCTTCTGGCTCAGGTTAAGGCTTTGGAGAATGAGATTTGGATTCTCCGGAGGGTGTCGCCGTCGCCTTACGTGGTGGAGTTACTCGGGGATGATTTCACGACGTCGTATCGGAATTTGCATATGGAGTATATGCCGGGTGGCACCCTCGCTGACTTGGGATCTCGGAATGCTGACGTGGATGACGAGTTGGTCAGGTACTATACTTGGTGCCTAGTGAACGCGCTGAGGCACGTCCACTCGAAGGGCGTCGTGCACTGCGACGTCAAGGGGAGGAACGTTCTGTTGGGGCCTAACGGCTGCGTCGCCAAGCTCGCCGATTTCGGCTCAGCGATTGAGTTTTCTGGTGAAGAGTGCTCGGCAGCGGTTGTGCCACGGGGGAGCCCACTTTGGATGGCTCCGGAGGTGATCCGGGGGGAGTATCAGGGACCAGAGTCCGACGTGTGGTCATTGGGATGCACGGTGATCGAGATGGTTAGCGGGAAACCGGCTTGGGAAGATCACGGCGGCGACACGCTGAGTCGGATCGGATACTCCGACGGCTTACCCGAATTCCCAGGTCAATGTTCAGAGCTTGCTCGGGATTTCCTCGAGAAGTGCCTGAGAAGAGAACCTAAACAGCGGTGGAGCTGCGATCAGCTGCTGCAGCACCCTTTTTTGTCATCTGCGTCTCCCAATAAGCCGGTGGAGTCGTCTCCTCGTTGCATTCTTGATTGGAACAGCTCAGAATTCACCGAAGACGAGGAAATCAGATTCGATAACAATGCTGAAACTTCAGCTAAGGAAAGAATCCGTAAATTATGCACAACACGGAGGGCAGATTGGGAAACAGAAGGTTGGGTGGCGGTGAGAGGATCGACATCAGACGCAGAAGCTACAGTAATAGAAACAGGGGACGGTGGAAGTGGGGTCGAAGCAGGGACAAATTCGGAATATGGGCATCGGACGGGGGTAGAAGAGGAAATGAAAGGAGGGACAAGTTGGGAATATTTGGATAAGGGAAGAAGGGCAAATCCGGGAAAGTGGGAATGGGATGATGGCATTGGCAAGTGGTGGTGGGTGTGGCGATGTGATCACAGGGAAGGCAACGAAAGAAGGAACTTAGCTGGTCGGAGCGGTCCAAATACGTATATGTCAGAAAATGTAGATATACCTTTAGTGCTGAGGATGAAAGTAATGACAAGTATTATTCACAGCATGTGTTGTAGATTATTCTTATCATGTTACCTAAATTCCTCACCATTAATAAATTCAACTATGTTATTTTCTACAATTATTTATTTTCTAGCGTTTTCCCTTGAACATTTATGTGCCAAGAAAATGTGGGTAGTTATGTTTTGTCAAAAGGAAAAACAAATTATTACAGCTCATAAATAA 1494 0.4967 MTSWVRGNCIGKGAFGTVSVGIDRWDGRVFAVKSVDLKMGLLAQVKALENEIWILRRVSPSPYVVELLGDDFTTSYRNLHMEYMPGGTLADLGSRNADVDDELVRYYTWCLVNALRHVHSKGVVHCDVKGRNVLLGPNGCVAKLADFGSAIEFSGEECSAAVVPRGSPLWMAPEVIRGEYQGPESDVWSLGCTVIEMVSGKPAWEDHGGDTLSRIGYSDGLPEFPGQCSELARDFLEKCLRREPKQRWSCDQLLQHPFLSSASPNKPVESSPRCILDWNSSEFTEDEEIRFDNNAETSAKERIRKLCTTRRADWETEGWVAVRGSTSDAEATVIETGDGGSGVEAGTNSEYGHRTGVEEEMKGGTSWEYLDKGRRANPGKWEWDDGIGKWWWVWRCDHREGNERRNLAGRSGPNTYMSENVDIPLVLRMKVMTSIIHSMCCRLFLSCYLNSSPLINSTMLFSTIIYFLAFSLEHLCAKKMWVVMFCQKEKQIITAHK 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1209 497 FunFam Serine threonine protein kinase putative 2 309 - -
Lele01g1209 497 ProSiteProfiles Protein kinase domain profile. 4 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1209 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Lele01g1209 497 SMART serkin_6 4 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1209 497 CDD STKc_MAPKKK 3 259 - -
Lele01g1209 497 SUPERFAMILY Protein kinase-like (PK-like) 3 286 IPR011009 -
Lele01g1209 497 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele01g1209 497 Gene3D Transferase(Phosphotransferase) domain 1 2 328 - -
Lele01g1209 497 Pfam Protein kinase domain 7 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele01g1209 497 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1209 Lele-ChrLele01 7271241 7272734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1209 4 380 MAP Kinase Kinase Kinase AT1G07150 53.003 5.00e-130 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele01g1209 Pkinase 1.4e-56 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1209 01 7271241 7272734 Lele01g1209 01 7271241 7272734 ECH
Lele01g1209 01 7271241 7272734 Lele03g1223 03 7214443 7225577 hybridization
Lele01g1209 01 7271241 7272734 Lele04g1463 04 19850313 19851740 hybridization