Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1205 ATGTCCACCACCCAACCTACTGACTCACACGCCAATCCTCTCAAGCAAATGCTTCAGAGCATCTTCTCCGACAACAGCAACATCATGCTCGCCGCCATCATTTCCCTCCTTCTCGTCATCCTCTTCGTCCTCCTCCTCCATCTCTACGCCAAATGGTTCCTGGCCCATGCTCACGCCCAAGCCCAAGCTCGTCGCCGACGCCGCAGGCGTCGCACGGCCTCCGTCACCGTCTCCGACGTCATTGGTCCCGCGCGATTTCACCACTTCCACAGCTTCAATCTACGGGACTCCCCCATTTCCAACTCCCCCACTAAAGGGCTGGATTCGGCATCCATTGCTGCGATTCCTGTATTCGTATACGAAGCAGAGTCCACCGCGGACGAAGAAGGTGACGATCGAGAATTGGAATGCGTAATTTGCTTGAGCGTTTTTGAGGATGGAGAAACCGGCAGGAGCTTACCCAAGTGTGGTCACGCTTTCCATGTCGAGTGTATCGATATGTGGTTTAACTCGCATTCGAATTGCCCAATCTGCAGGTCTCCGATTGTGGAGCTTGATTCTCAATTGTCGGGTTCCGTTCATGATCAGGATGATTCCTCTGCTGTGCTTGAGATTGTAATCGATTTTCCGAGTTCTGAGATCAGTGAGAACGACCGTGGAACTGAGATTATTATTAGTGCTAACAATGATAATGATAATAATGGAGGGATAAGTAGTGACTCAGCTATTTCTATATCAGAAACTTCATCCTCATTGTTGGGTTGTTCATTGAAGAGGATGTTCAGTAAAGTTTTTCCTTCTTCCAATGTCAGTGATGAGATAAGCACATGA 831 0.491 MSTTQPTDSHANPLKQMLQSIFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAHAHAQAQARRRRRRRRTASVTVSDVIGPARFHHFHSFNLRDSPISNSPTKGLDSASIAAIPVFVYEAESTADEEGDDRELECVICLSVFEDGETGRSLPKCGHAFHVECIDMWFNSHSNCPICRSPIVELDSQLSGSVHDQDDSSAVLEIVIDFPSSEISENDRGTEIIISANNDNDNNGGISSDSAISISETSSSLLGCSLKRMFSKVFPSSNVSDEIST 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1205 276 ProSiteProfiles Zinc finger RING-type profile. 137 179 IPR001841 -
Lele01g1205 276 FunFam RING-H2 finger protein ATL1 95 184 - -
Lele01g1205 276 SUPERFAMILY RING/U-box 120 185 - -
Lele01g1205 276 SMART FANCL_C_2 133 186 - -
Lele01g1205 276 SMART ring_2 137 178 IPR001841 -
Lele01g1205 276 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 20 184 IPR044675 -
Lele01g1205 276 CDD RING-H2_EL5_like 136 179 - -
Lele01g1205 276 Pfam Ring finger domain 136 179 IPR001841 -
Lele01g1205 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 183 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1205 Lele-ChrLele01 7224447 7225277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1205 22 180 Rapid Response to Elicitors AT3G16720 40.881 4.98e-31 115