Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1201 ATGCTGCGGGATAAAAAGGCTAGTGGCATTAAATACAACACCCAGTACCGCAAACAGGACCAAACACGGAACCAGCGCGCCTCGTCGTTTACCGATCGTGATTCAATGGAAGCCGGAAAATGCAGCAAAATCAGATGCATTGTCAGGCTGCGTCAGATGCTCCGACGGTGGCGCAACAAGGCGCGTATGTCGTCGGCGTGCGGCGTTCCGTCGGATGTCCCTCCTGGCCATGTGGCAGTCCGGGTCGGCAGAGACTGTCCCCGGAGGTATGTCGTGAAGGCCACCTATCTGAATCACCCCTTCCTCAAGAAGCTACTGAATCAGGTGGAGGAAGAGTATGGCTTTGCCAACACCGGACCGCTCTCTATCCCGTGCGACGAAGAAGCTTTCCAAGAGGTTCTCCTGTTTGTTTCGCGGTCAGACTCGGGTAAATCGGCCCGGTTCCGTAACCTCGACGATTTTCACAGGTATTGCCACGAGGGTTTGAGGAACAACCGGGAAATCTGGCAAGAATGTCGACCGCTGCTTCATGGTTTTACTTCTGCTCAGTGA 552 0.5453 MLRDKKASGIKYNTQYRKQDQTRNQRASSFTDRDSMEAGKCSKIRCIVRLRQMLRRWRNKARMSSACGVPSDVPPGHVAVRVGRDCPRRYVVKATYLNHPFLKKLLNQVEEEYGFANTGPLSIPCDEEAFQEVLLFVSRSDSGKSARFRNLDDFHRYCHEGLRNNREIWQECRPLLHGFTSAQ 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1201 183 MobiDBLite consensus disorder prediction 12 32 - -
Lele01g1201 183 Pfam Auxin responsive protein 49 135 IPR003676 GO:0009733
Lele01g1201 183 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 56 134 IPR003676 GO:0009733
Lele01g1201 183 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1201 Lele-ChrLele01 7195109 7195739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1201 39 180 Calmodulin-binding Proteins AT4G34750 50.000 6.84e-43 139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1201 01 7195109 7195739 Lele01g1201 01 7195109 7195739 ECH
Lele01g1201 01 7195109 7195739 Lele03g1215 03 7162554 7165014 hybridization