Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1200 ATGATTCAGATGGACCGTCGCTGGCCCTGGAAGAAAAAATCAGATAAGACAGTGCTTGAGAAAGCAGCTGCTGCATTGGACTCTGCCGGTGCTGGTGCCACTGGTCAGGGCAGTCAGGATAATTACAGGAAGCCAAACTATGTGCAAATTTCTGTGGAGTCATATTCACATCTGAGTAGCTTGGAGGACCAAGTGAAGACATTTGATGAAAAATTTCAGACACTGGAAGATGAGGTTAAAGAATTGAATGAAAAGCTGTCAGCGGCAAACTTAGAGATAACTACCAAGGAAAGCTTAGTAAAACAACATGCTAAAGTAGCTGAAGAAGCTGTTTCAGAACCTTTTGTTGTTTCTGGATTTAGAGTTCACCTTGAAAGTCCTCTTTATGCAGGCTGGGAAAAGGCAGAAGCGGAAGCTTTGGCGTTGAAGAATCATCTAGAATCTGTCACACTGTCAAAGCTCACCTCTGAGGATCGGGCATCACATTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATAAGAAACCTGAAGGAAGAACACGAGCAGAAAATACAGGAAGTTGCTCTCACCAAAACCAAGCAATTAGATAAAATTAAGGGTGAGCTTGACGCAAAGATAGCTAACTTAGAACAAGAACTTCTTAGGTCCGCTGCTGAAAATGGGGCTCTTTCAAGGTCTTTACAGGAGCGCTCTAACATGCTAATCAAAATTAGCGAAGAGAAGGCTCAGGCTGAAGCTGATATTGAGCTTTTGAAGGGAAACATAGAATCATGTGAAAGGGAAATCAATTCACTGAAGTATGAACTTCATATTGTGTCTAAGGAGCTGGAAATTCGTAATGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAGGCAGCATGCAGAGGGTGTTAAAAAAATTGCAAAGTTGGAGGCTGAGTGCCAAAGATTACGAGGTCTGGTGCGGAAAAAGTTACCTGGTCCTGCTGCACTAGCCCAAATGAAGCTGGAAGTTGAGAATCTTGGCCGAGACTTTGGAGACACTCGGAGGTCTTCTGTTAAGCCTGGCAGTCCACATTTGCCACCATCACCTGATTTCTCCCTAGGGAATATTCAGAAATTTCAGAAGGAGAATGAATTTCTTACAGAGCGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTCAAAGAAGCTTTGGCAAAACGGAACAGTGAATTGCAGGCCTCAAGGAGCATGTGTGCTAAAACTCTGAGCAAACTTCAAAGTTTGGAAGCACAACTTCAGCCAATTGACCAACATAAAGGATCTCCAAAATCCATCATCCAGATAACCCATGAAAGTATTTATGGTCAAAATGCAAGCATTGCACCAAGCTTTACCTCCCTGTCTGAAGATGAAAATGATGTCGGAAAATGTGCCGAGTCATGGTCTACAACATCGATCTCAGAACTATCCCAATCCCAAAAAGAAAAGAATATTGAGAAATCAAGCATATCTGGGGCCACTAATAAGTTGGAACTGATGGATGACTTTCTGGAGGTGGAGAAGTTGGCCTGTCTACCAAATGATTCCAATGGCTCTATTTCAATGTCTTCAAGCAATACAACTGAAATTGTGATCAAACATGTATCAGAACTCAGTACTTGCATTGATGGTTCCTCTGAAAAGCAGAATGATTTGAATCCATCACCCAATCCAGTGTCTTCTGGTGAAGTGTTGTCAGCCCCTGATGCCCAAGCTGGTGTTAATTACTTGTCACCGACACAGCTTAGATCAAGAATTTTGACGGTTTTTGAGTCCATGTCTAGCAATGCTGATATAGGAAATATCCTTGAAGATATTAAACATATTTTGGAAGGTGCACGTGATGCTTCCAACAACCATTCTGTTGAACGTGTACACCAGGATGTCCATCCTTCCGATGCTACATGTGACAGGCAAGTTAATCCAGAAGATCTTGGCTCACATCTTGAAAAGGAAATCATTTCATCGAAGCAAACAATAGAACACATGCAGATGACCACAGAGTTGGAAGCTGCAATTTCTCATATTCATAACTTTGTGCTGTTCCTAGGTAGAGAAGCAATGTCAGTTCATGACATTTCTGCTTATGGAGGAGTGAAGCTAGAGATTGAGGAATTTTCTCACACCTTTAATAAAGTCATATGCAATGAAGCAACTTTGCTGCAGTTTGTTTTGGATTTGTCATGTGTATTAGCTAAGGCAAGTGAATTCAGATTTAATGTCCTTGGCTATATGGGTACAGAAGCTGAAACTAACAGTCCTGATTGCATTGACAAGGTTGCTTTGCCAGAAAATAAGTTAGTTCAAAACAGTCCGTCAGGACAAAGATATCCAAATGGCTGTTCCCATATTCTTAATCGTTGTGCTGATCCTCAGGTACCTGATGATGGAAATTTGATCTCTACCTATGAATCAAATGGTACTTCACGCCAATTCTCAGTGAATAAGTTTGAAGAATTGAAATTAGAGAAAGAGAAGACAGCAAGGGATCTGGCAAGATGCACTGAAACTCTTGAATCAACAAAGTCTCAATTACAAGAGACTGAGCAACTTTTGGCAGAAGTGAAATCACAACTGGCTGCTTCTCAAAGATTAAACAGCTTGGCTGAGACGCAGCTGAAATGTATGGCAGAGTCATACAGGACCCTTGAAACACGTGCGCAGGAGTTAGAAACCCAGCTGAATCTTCTGCAAGTTAAGACAGAAACTCTGGAGTGTGAACTTCAAGATGAAAAGAGCGATTGCGAAGATGCTGTGGCCAAGTACAAGGAACTACAAGAGCAATTGCAAAGGTATGAGAGCTCAGCAGCTGATAATGACCTCAAGACTATGCAGGAGAGAGATTTGGCGGCAGCCGTGGAAAAGTTAGCCGAGTGTCAGGAAACAATATTTCTTCTTGGCAAGCAGCTACAAACCCTACGCCCTCAAAGGGAGCAGGGTGGATCTCCTTACAGCGAGAGAAGTTCAAAGGTTGATGAAGGGCTTACAGAGGAAGAGCCTACTATAAGTAACCCAAATTTGCAAGAGTTAGATGATATGGACAGTGCTAGTTCAGCATTTGTGCAAAGATTGGGTCCGGAGTCACCCTTGTATTTCTCCAACGGTCTTTGTCCATCTGACAATGAAGCAAACCTTGCCACCATATCTCCAGCAAAGAATCCAAAACATCGGCCTACTAAATCAACCTCCTTCTCCGTTTCTTCCGCCCCCACGCCGGAGAAACTCACGCATGCACGAGGATTTAGTAGATTATTTTCATCAAAAGGGAAAAATGGGCGTTAA 3300 0.4233 MIQMDRRWPWKKKSDKTVLEKAAAALDSAGAGATGQGSQDNYRKPNYVQISVESYSHLSSLEDQVKTFDEKFQTLEDEVKELNEKLSAANLEITTKESLVKQHAKVAEEAVSEPFVVSGFRVHLESPLYAGWEKAEAEALALKNHLESVTLSKLTSEDRASHLDGALKECMRQIRNLKEEHEQKIQEVALTKTKQLDKIKGELDAKIANLEQELLRSAAENGALSRSLQERSNMLIKISEEKAQAEADIELLKGNIESCEREINSLKYELHIVSKELEIRNEEKNMSMRSAEAANRQHAEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRDFGDTRRSSVKPGSPHLPPSPDFSLGNIQKFQKENEFLTERLLAMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQLQPIDQHKGSPKSIIQITHESIYGQNASIAPSFTSLSEDENDVGKCAESWSTTSISELSQSQKEKNIEKSSISGATNKLELMDDFLEVEKLACLPNDSNGSISMSSSNTTEIVIKHVSELSTCIDGSSEKQNDLNPSPNPVSSGEVLSAPDAQAGVNYLSPTQLRSRILTVFESMSSNADIGNILEDIKHILEGARDASNNHSVERVHQDVHPSDATCDRQVNPEDLGSHLEKEIISSKQTIEHMQMTTELEAAISHIHNFVLFLGREAMSVHDISAYGGVKLEIEEFSHTFNKVICNEATLLQFVLDLSCVLAKASEFRFNVLGYMGTEAETNSPDCIDKVALPENKLVQNSPSGQRYPNGCSHILNRCADPQVPDDGNLISTYESNGTSRQFSVNKFEELKLEKEKTARDLARCTETLESTKSQLQETEQLLAEVKSQLAASQRLNSLAETQLKCMAESYRTLETRAQELETQLNLLQVKTETLECELQDEKSDCEDAVAKYKELQEQLQRYESSAADNDLKTMQERDLAAAVEKLAECQETIFLLGKQLQTLRPQREQGGSPYSERSSKVDEGLTEEEPTISNPNLQELDDMDSASSAFVQRLGPESPLYFSNGLCPSDNEANLATISPAKNPKHRPTKSTSFSVSSAPTPEKLTHARGFSRLFSSKGKNGR 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1200 1099 Coils Coil 160 220 - -
Lele01g1200 1099 MobiDBLite consensus disorder prediction 1048 1078 - -
Lele01g1200 1099 SUPERFAMILY Tropomyosin 824 979 - -
Lele01g1200 1099 Coils Coil 879 948 - -
Lele01g1200 1099 Pfam Filament-like plant protein, long coiled-coil 96 985 IPR008587 -
Lele01g1200 1099 MobiDBLite consensus disorder prediction 980 1016 - -
Lele01g1200 1099 MobiDBLite consensus disorder prediction 550 569 - -
Lele01g1200 1099 MobiDBLite consensus disorder prediction 1048 1099 - -
Lele01g1200 1099 Coils Coil 369 396 - -
Lele01g1200 1099 Coils Coil 58 99 - -
Lele01g1200 1099 Coils Coil 823 871 - -
Lele01g1200 1099 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 4 1094 - -
Lele01g1200 1099 Coils Coil 235 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1200 Lele-ChrLele01 7178056 7182198 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0080 25 464926 469307 Lele01g1200 01 7178056 7182198 CCT
Lele26g0091 26 489035 493917 Lele01g1200 01 7178056 7182198 CCT
Lele27g2006 27 24243492 24248329 Lele01g1200 01 7178056 7182198 CCT
Lele28g0090 28 497956 509370 Lele01g1200 01 7178056 7182198 CCT
Lele01g1200 01 7178056 7182198 Lele01g1200 01 7178056 7182198 ECH
Lele01g1200 01 7178056 7182198 Lele03g1214 03 7145268 7149235 hybridization
Lele01g1200 01 7178056 7182198 Lele04g1452 04 19747213 19752857 hybridization