Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1199 ATGTCGTCGCTGAGAAGTATCTGCAGAGAGAAAATGGGACTCAGAAACACAAGGAGGGTTGCATCAGAGAGAACAGTGATGAAGGAAATAGTGAAGAGATGGTCAAGTAAGATGAAGAGGGAAGAAGAAGAGGAAGAGGAGGGCTTGCCCATGGACGTTCCAAAGGGTCATTTTGTGGTATATGTGGGAGAGAAGAGAATCAGATACATTGTGCCTATTTGGTTTCTGAGACGCCCTGAGTTTCAGAGGTTGCTTCATGAAGCAGCTCTAGAGTTTGGGTTTTGCCATCAAAGTGGTCTCACGATTCCTTGCCAACAACATGTTTTTGAGTCTATTATAACTAAATTGCTTGGACCGTGA 360 0.4417 MSSLRSICREKMGLRNTRRVASERTVMKEIVKRWSSKMKREEEEEEEGLPMDVPKGHFVVYVGEKRIRYIVPIWFLRRPEFQRLLHEAALEFGFCHQSGLTIPCQQHVFESIITKLLGP 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1199 119 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 112 IPR003676 GO:0009733
Lele01g1199 119 Pfam Auxin responsive protein 32 114 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1199 Lele-ChrLele01 7174112 7174471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1199 27 114 Calmodulin-binding Proteins AT4G34750 40.449 2.27e-16 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1199 01 7174112 7174471 Lele01g1199 01 7174112 7174471 ECH
Lele01g1199 01 7174112 7174471 Lele03g1213 03 7140529 7140900 hybridization
Lele01g1199 01 7174112 7174471 Lele04g1451 04 19742767 19743120 hybridization